RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 PDGFRBP09619 1106 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 ARSAP15289 507 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 HDCP19113 662 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 HOXA6P31267 233 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 ME1P48163 572 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 CYP2J2P51589 502 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 ATXN1P54253 815 aaKnown RBP15.01□□□□□ -0.01
TPM1-202ENST00000288398 SNRPFP62306 86 aaKnown RBP15.01□□□□□ -0.01
TPM1-202ENST00000288398 DMWDQ09019 674 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 PSMD2Q13200 908 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 SRSF5Q13243 272 aaKnown RBP15.01□□□□□ -0.01
TPM1-202ENST00000288398 FOXD4L5Q5VV16 416 aaPredicted RBP15.01□□□□□ -0.01
TPM1-202ENST00000288398 HSCBQ8IWL3 235 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 NELFCDQ8IXH7 590 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 XXYLT1Q8NBI6 393 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 OR5B17Q8NGF7 314 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 OR6B3Q8NGW1 331 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 NETO1Q8TDF5 533 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 OSCP1Q8WVF1 389 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 FOXD4L4Q8WXT5 416 aaPredicted RBP15.01□□□□□ -0.01
TPM1-202ENST00000288398 CCDC127Q96BQ5 260 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 CEP295NLQ96MC4 621 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 SEMA4GQ9NTN9 838 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 CEP250Q9BV73 2442 aa15.01□□□□□ -0.01
TPM1-202ENST00000288398 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15□□□□□ -0.01
TPM1-202ENST00000288398 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15□□□□□ -0.01
TPM1-202ENST00000288398 RNF40O75150 1001 aa15□□□□□ -0.01
TPM1-202ENST00000288398 RPP40O75818 363 aaKnown RBP15□□□□□ -0.01
TPM1-202ENST00000288398 ABL1P00519 1130 aa15□□□□□ -0.01
TPM1-202ENST00000288398 WARSP23381 471 aaKnown RBP15□□□□□ -0.01
TPM1-202ENST00000288398 BDNFP23560 247 aa15□□□□□ -0.01
TPM1-202ENST00000288398 GNL1P36915 607 aaPredicted RBP15□□□□□ -0.01
TPM1-202ENST00000288398 CSRP2Q16527 193 aa15□□□□□ -0.01
TPM1-202ENST00000288398 FOXD4L6Q3SYB3 417 aaPredicted RBP15□□□□□ -0.01
TPM1-202ENST00000288398 FSTL4Q6MZW2 842 aa15□□□□□ -0.01
TPM1-202ENST00000288398 FAM171BQ6P995 826 aa15□□□□□ -0.01
TPM1-202ENST00000288398 FOXD4L3Q6VB84 417 aaPredicted RBP15□□□□□ -0.01
TPM1-202ENST00000288398 DENND5BQ6ZUT9 1274 aa15□□□□□ -0.01
TPM1-202ENST00000288398 UNC13DQ70J99 1090 aa15□□□□□ -0.01
TPM1-202ENST00000288398 TRAPPC11Q7Z392 1133 aa15□□□□□ -0.01
TPM1-202ENST00000288398 CACNA2D4Q7Z3S7 1137 aa15□□□□□ -0.01
TPM1-202ENST00000288398 CEP57L1Q8IYX8 460 aa15□□□□□ -0.01
TPM1-202ENST00000288398 ARL14EPQ8N8R7 260 aaPredicted RBP15□□□□□ -0.01
TPM1-202ENST00000288398 C12orf50Q8NA57 414 aaPredicted RBP15□□□□□ -0.01
TPM1-202ENST00000288398 GLIS3Q8NEA6 775 aa15□□□□□ -0.01
TPM1-202ENST00000288398 CXorf38Q8TB03 319 aa15□□□□□ -0.01
TPM1-202ENST00000288398 ZNF507Q8TCN5 953 aa15□□□□□ -0.01
TPM1-202ENST00000288398 SH3RF2Q8TEC5 729 aa15□□□□□ -0.01
TPM1-202ENST00000288398 ACDQ96AP0 544 aa15□□□□□ -0.01
TPM1-202ENST00000288398 SPATA17Q96L03 361 aa15□□□□□ -0.01
TPM1-202ENST00000288398 PKMYT1Q99640 499 aa15□□□□□ -0.01
TPM1-202ENST00000288398 ECT2Q9H8V3 914 aa15□□□□□ -0.01
TPM1-202ENST00000288398 PARD6AQ9NPB6 346 aa15□□□□□ -0.01
TPM1-202ENST00000288398 AGPAT3Q9NRZ7 376 aa15□□□□□ -0.01
TPM1-202ENST00000288398 WNT6Q9Y6F9 365 aa15□□□□□ -0.01
TPM1-202ENST00000288398 DYNC1LI1Q9Y6G9 523 aaKnown RBP15□□□□□ -0.01
TPM1-202ENST00000288398 ATP8B3O60423 1300 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 PTPRJQ12913 1337 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 CLIC2O15247 247 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 POLR2DO15514 142 aaKnown RBP14.99□□□□□ -0.01
TPM1-202ENST00000288398 HCRTO43612 131 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 ATP2C2O75185 946 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 TADA3O75528 432 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 NFATC1O95644 943 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 EGFP01133 1207 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 PFKLP17858 780 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 GJA4P35212 333 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 PPP3CCP48454 512 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 GALK1P51570 392 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 PSMD6Q15008 389 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 E2F4Q16254 413 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 WDR72Q3MJ13 1102 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 AASDHQ4L235 1098 aaPredicted RBP14.99□□□□□ -0.01
TPM1-202ENST00000288398 MDH1BQ5I0G3 518 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 PRR23CQ6ZRP0 262 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 CAMKK1Q8N5S9 505 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 FAM160A2Q8N612 972 aaPredicted RBP14.99□□□□□ -0.01
TPM1-202ENST00000288398 GOLGA5Q8TBA6 731 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 MYCBPAPQ8TBZ2 947 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 KBTBD7Q8WVZ9 684 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 GAB3Q8WWW8 586 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 CD101Q93033 1021 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 CYP2S1Q96SQ9 504 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 CGRRF1Q99675 332 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 C7orf25Q9BPX7 421 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 BACH2Q9BYV9 841 aa14.99□□□□□ -0.01
TPM1-202ENST00000288398 CGNQ9P2M7 1197 aaKnown RBP14.99□□□□□ -0.01
TPM1-202ENST00000288398 DCHS1Q96JQ0 3298 aa14.98□□□□□ -0.01
TPM1-202ENST00000288398 CCDC163A0A0D9SF12 145 aa14.98□□□□□ -0.01
TPM1-202ENST00000288398 DCDC2BA2VCK2 349 aa14.98□□□□□ -0.01
TPM1-202ENST00000288398 C2orf78A6NCI8 922 aa14.98□□□□□ -0.01
TPM1-202ENST00000288398 EXOC3O60645 756 aa14.98□□□□□ -0.01
TPM1-202ENST00000288398 KCNA4P22459 653 aa14.98□□□□□ -0.01
TPM1-202ENST00000288398 LMO2P25791 158 aa14.98□□□□□ -0.01
TPM1-202ENST00000288398 PXNP49023 591 aaPredicted RBP14.98□□□□□ -0.01
TPM1-202ENST00000288398 CYP24A1Q07973 514 aa14.98□□□□□ -0.01
TPM1-202ENST00000288398 IFRD2Q12894 506 aaPredicted RBP14.98□□□□□ -0.01
TPM1-202ENST00000288398 USP4Q13107 963 aa14.98□□□□□ -0.01
TPM1-202ENST00000288398 BIRC3Q13489 604 aa14.98□□□□□ -0.01
TPM1-202ENST00000288398 ZNF77Q15935 545 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms