RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 ACAP1Q15027 740 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 MAPKAPK3Q16644 382 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 FAM110CQ1W6H9 321 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 ZMYM1Q5SVZ6 1142 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 CNKSR3Q6P9H4 555 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 TMTC3Q6ZXV5 915 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 OTOP1Q7RTM1 612 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 SLC44A2Q8IWA5 706 aaPredicted RBP2.96□□□□□ -1.94
CHD1-201ENST00000284049 KLHL7Q8IXQ5 586 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 SAAL1Q96ER3 474 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 THUMPD3Q9BV44 507 aaKnown RBP2.96□□□□□ -1.94
CHD1-201ENST00000284049 TRIM6Q9C030 488 aaPredicted RBP2.96□□□□□ -1.94
CHD1-201ENST00000284049 KCMF1Q9P0J7 381 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 FEM1BQ9UK73 627 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 CICQ96RK0 1608 aaPredicted RBP2.96□□□□□ -1.94
CHD1-201ENST00000284049 RALGAPBQ86X10 1494 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 YEATS2Q9ULM3 1422 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 PNMA6EA0A0J9YXQ4 647 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 M0QYG6 137 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 TXNL1O43396 289 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 FRS3O43559 492 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 HTATSF1O43719 755 aaKnown RBP2.96□□□□□ -1.94
CHD1-201ENST00000284049 CLASP2O75122 1294 aaKnown RBP2.96□□□□□ -1.94
CHD1-201ENST00000284049 GJB1P08034 283 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 VAV1P15498 845 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 KCNA2P16389 499 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 ATF7P17544 494 aaPredicted RBP2.96□□□□□ -1.94
CHD1-201ENST00000284049 SCP2P22307 547 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 PIP4K2AP48426 406 aaPredicted RBP2.96□□□□□ -1.94
CHD1-201ENST00000284049 PIK3CGP48736 1102 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 RRP1P56182 461 aaKnown RBP2.96□□□□□ -1.94
CHD1-201ENST00000284049 FOXO1Q12778 655 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 BFSP2Q13515 415 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 GALEQ14376 348 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 VEPH1Q14D04 833 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 CCDC186Q7Z3E2 898 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 BRSK2Q8IWQ3 736 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 OR5M3Q8NGP4 307 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 MRPS27Q92552 414 aaKnown RBP2.96□□□□□ -1.94
CHD1-201ENST00000284049 CENPTQ96BT3 561 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 CTAGE1Q96RT6 745 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 OSBPL6Q9BZF3 934 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 ZNF518BQ9C0D4 1074 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 SLC6A20Q9NP91 592 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 SRP68Q9UHB9 627 aaKnown RBP2.96□□□□□ -1.94
CHD1-201ENST00000284049 DNAI1Q9UI46 699 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 MTO1Q9Y2Z2 717 aaKnown RBP2.96□□□□□ -1.94
CHD1-201ENST00000284049 MTF2Q9Y483 593 aaPredicted RBP2.96□□□□□ -1.94
CHD1-201ENST00000284049 CDY2AQ9Y6F7 541 aa2.96□□□□□ -1.94
CHD1-201ENST00000284049 KRT87PA6NCN2 255 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 SGTAO43765 313 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 VPS4BO75351 444 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 MAFO75444 373 aaPredicted RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 IPO7O95373 1038 aaKnown RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 GGT5P36269 586 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 DPP6P42658 865 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 TSTQ16762 297 aaKnown RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 CRELD2Q6UXH1 353 aaPredicted RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 EPHX4Q8IUS5 362 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 RNF168Q8IYW5 571 aaPredicted RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 SYNE4Q8N205 404 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 PRR18Q8N4B5 295 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 GOT1L1Q8NHS2 421 aaPredicted RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 PTERQ96BW5 349 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 DPH5Q9H2P9 285 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 TAS2R10Q9NYW0 307 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 CALCOCO1Q9P1Z2 691 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 KIF15Q9NS87 1388 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 hCG_1809904A0A1W2PP81 198 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 A0A1W2PPE2 198 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 A0A1W2PR64 198 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 NUDT19A8MXV4 375 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 H0Y626 953 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 J3KTA2 159 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 NDC80O14777 642 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 KRT5P13647 590 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 FDPSP14324 419 aaKnown RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 GJA1P17302 382 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 KCNA6P17658 529 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 POU6F2P78424 691 aaPredicted RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.95□□□□□ -1.94
CHD1-201ENST00000284049 SEMA3AQ14563 771 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 C2orf76Q3KRA6 126 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 PREPLQ4J6C6 727 aaPredicted RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 RAB12Q6IQ22 244 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 CEP97Q8IW35 865 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 TSPYL6Q8N831 410 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 PLBD2Q8NHP8 589 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 TNFRSF25Q93038 417 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 ZC3H10Q96K80 434 aaKnown RBP2.95□□□□□ -1.94
CHD1-201ENST00000284049 MMP19Q99542 508 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.95□□□□□ -1.942e-10■■■■■ 42.7
CHD1-201ENST00000284049 PCDHGB5Q9Y5G0 923 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 NUMBLQ9Y6R0 609 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 PIK3C2GO75747 1445 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 LTBP4Q8N2S1 1624 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 RNF103-CHMP3A0A140T963 221 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 TRIM64CA6NLI5 447 aa2.95□□□□□ -1.94
CHD1-201ENST00000284049 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms