RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 PRPF39Q86UA1 669 aaKnown RBP19.54■□□□□ 0.72
SSC4D-201ENST00000275560 PHF13Q86YI8 300 aaPredicted RBP19.54■□□□□ 0.72
SSC4D-201ENST00000275560 PPIL6Q8IXY8 311 aa19.54■□□□□ 0.72
SSC4D-201ENST00000275560 AGTPBP1Q9UPW5 1226 aa19.54■□□□□ 0.72
SSC4D-201ENST00000275560 DRG1Q9Y295 367 aaKnown RBP19.54■□□□□ 0.72
SSC4D-201ENST00000275560 TMX2Q9Y320 296 aa19.54■□□□□ 0.72
SSC4D-201ENST00000275560 SCN9AQ15858 1988 aa19.54■□□□□ 0.72
SSC4D-201ENST00000275560 GSTA2P09210 222 aa19.53■□□□□ 0.72
SSC4D-201ENST00000275560 ELK3P41970 407 aa19.53■□□□□ 0.72
SSC4D-201ENST00000275560 ZACNQ401N2 412 aa19.53■□□□□ 0.72
SSC4D-201ENST00000275560 ARID3BQ8IVW6 561 aaPredicted RBP19.53■□□□□ 0.72
SSC4D-201ENST00000275560 FAM71DQ8N9W8 422 aa19.53■□□□□ 0.72
SSC4D-201ENST00000275560 UBE2OQ9C0C9 1292 aaKnown RBP19.53■□□□□ 0.72
SSC4D-201ENST00000275560 TJP2Q9UDY2 1190 aa19.53■□□□□ 0.72
SSC4D-201ENST00000275560 CST8O60676 142 aa19.53■□□□□ 0.72
SSC4D-201ENST00000275560 RNASEH1O60930 286 aaKnown RBP19.53■□□□□ 0.72
SSC4D-201ENST00000275560 ITGBL1O95965 494 aaPredicted RBP19.53■□□□□ 0.72
SSC4D-201ENST00000275560 GTF2H1P32780 548 aa19.53■□□□□ 0.72
SSC4D-201ENST00000275560 ALDH18A1P54886 795 aaKnown RBP19.53■□□□□ 0.72
SSC4D-201ENST00000275560 BPIFB4P59827 614 aa19.53■□□□□ 0.72
SSC4D-201ENST00000275560 TRAF1Q13077 416 aa19.53■□□□□ 0.72
SSC4D-201ENST00000275560 AOC3Q16853 763 aa19.53■□□□□ 0.72
SSC4D-201ENST00000275560 CNPY1Q3B7I2 92 aa19.53■□□□□ 0.72
SSC4D-201ENST00000275560 RAPH1Q70E73 1250 aa19.53■□□□□ 0.72
SSC4D-201ENST00000275560 SLC35B2Q8TB61 432 aa19.53■□□□□ 0.72
SSC4D-201ENST00000275560 NKD2Q969F2 451 aaPredicted RBP19.53■□□□□ 0.72
SSC4D-201ENST00000275560 CEP170P1Q96L14 293 aa19.53■□□□□ 0.72
SSC4D-201ENST00000275560 ACAP3Q96P50 834 aa19.53■□□□□ 0.72
SSC4D-201ENST00000275560 PHACTR1Q9C0D0 580 aa19.53■□□□□ 0.72
SSC4D-201ENST00000275560 IRAK4Q9NWZ3 460 aa19.53■□□□□ 0.72
SSC4D-201ENST00000275560 NFASCO94856 1347 aa19.53■□□□□ 0.72
SSC4D-201ENST00000275560 SORBS2O94875 1100 aaKnown RBP19.52■□□□□ 0.72
SSC4D-201ENST00000275560 C4BPAP04003 597 aaKnown RBP19.52■□□□□ 0.72
SSC4D-201ENST00000275560 PYGLP06737 847 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 SPATA31D3P0C874 917 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 DHRS4L1P0CG22 281 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 BRD2P25440 801 aaKnown RBP19.52■□□□□ 0.72
SSC4D-201ENST00000275560 SNRPFP62306 86 aaKnown RBP19.52■□□□□ 0.72
SSC4D-201ENST00000275560 KRT72Q14CN4 511 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 KLHL38Q2WGJ6 581 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 DACT2Q5SW24 774 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 ISLR2Q6UXK2 745 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 SPATA31D4Q6ZUB0 917 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 APLFQ8IW19 511 aaPredicted RBP19.52■□□□□ 0.72
SSC4D-201ENST00000275560 SCUBE1Q8IWY4 988 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.52■□□□□ 0.72
SSC4D-201ENST00000275560 CCDC110Q8TBZ0 833 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 ZNF606Q8WXB4 792 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 TAAR1Q96RJ0 339 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 ASCC2Q9H1I8 757 aaPredicted RBP19.52■□□□□ 0.72
SSC4D-201ENST00000275560 SLC7A8Q9UHI5 535 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 TCRBV9S1A1TA0A576 114 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 KBTBD13C9JR72 458 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 YWHAGP61981 247 aaKnown RBP eCLIP19.52■□□□□ 0.72
SSC4D-201ENST00000275560 MCL1Q07820 350 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 UBAP2LQ14157 1087 aaKnown RBP19.52■□□□□ 0.72
SSC4D-201ENST00000275560 ZRSR2Q15696 482 aaKnown RBP19.52■□□□□ 0.72
SSC4D-201ENST00000275560 DNAJC24Q6P3W2 148 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 ULK2Q8IYT8 1036 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 OR5B17Q8NGF7 314 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 CHURC1Q8WUH1 139 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 MASTLQ96GX5 879 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 APOPT1Q96IL0 206 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 SLC13A1Q9BZW2 595 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 HAPLN2Q9GZV7 340 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 EBF3Q9H4W6 596 aa19.52■□□□□ 0.72
SSC4D-201ENST00000275560 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.52■□□□□ 0.71
SSC4D-201ENST00000275560 TOP3BO95985 862 aaKnown RBP19.52■□□□□ 0.71
SSC4D-201ENST00000275560 HARSP12081 509 aaKnown RBP19.52■□□□□ 0.71
SSC4D-201ENST00000275560 MMP8P22894 467 aa19.52■□□□□ 0.71
SSC4D-201ENST00000275560 IL1R2P27930 398 aa19.52■□□□□ 0.71
SSC4D-201ENST00000275560 CUL3Q13618 768 aa19.52■□□□□ 0.71
SSC4D-201ENST00000275560 USP37Q86T82 979 aa19.52■□□□□ 0.71
SSC4D-201ENST00000275560 C4orf19Q8IY42 314 aa19.52■□□□□ 0.71
SSC4D-201ENST00000275560 RSAD2Q8WXG1 361 aa19.52■□□□□ 0.71
SSC4D-201ENST00000275560 NGLY1Q96IV0 654 aa19.52■□□□□ 0.71
SSC4D-201ENST00000275560 ECSITQ9BQ95 431 aa19.52■□□□□ 0.71
SSC4D-201ENST00000275560 TUBB6Q9BUF5 446 aa19.52■□□□□ 0.71
SSC4D-201ENST00000275560 C20orf27Q9GZN8 174 aa19.52■□□□□ 0.71
SSC4D-201ENST00000275560 STRIP2Q9ULQ0 834 aa19.52■□□□□ 0.71
SSC4D-201ENST00000275560 NRXN2Q9P2S2 1712 aa19.52■□□□□ 0.71
SSC4D-201ENST00000275560 TESPA1A2RU30 521 aaPredicted RBP19.51■□□□□ 0.71
SSC4D-201ENST00000275560 C1QBPQ07021 282 aaKnown RBP19.51■□□□□ 0.71
SSC4D-201ENST00000275560 CDC16Q13042 620 aa19.51■□□□□ 0.71
SSC4D-201ENST00000275560 DLGAP5Q15398 846 aa19.51■□□□□ 0.71
SSC4D-201ENST00000275560 SLC5A9Q2M3M2 681 aa19.51■□□□□ 0.71
SSC4D-201ENST00000275560 CFAP157Q5JU67 520 aa19.51■□□□□ 0.71
SSC4D-201ENST00000275560 C1orf146Q5VVC0 180 aa19.51■□□□□ 0.71
SSC4D-201ENST00000275560 B4GALNT2Q8NHY0 566 aa19.51■□□□□ 0.71
SSC4D-201ENST00000275560 LRRN4Q8WUT4 740 aa19.51■□□□□ 0.71
SSC4D-201ENST00000275560 USP6NLQ92738 828 aa19.51■□□□□ 0.71
SSC4D-201ENST00000275560 EZH1Q92800 747 aaPredicted RBP19.51■□□□□ 0.71
SSC4D-201ENST00000275560 IKBKGQ9Y6K9 419 aa19.51■□□□□ 0.71
SSC4D-201ENST00000275560 LRRC37AA6NMS7 1700 aa19.51■□□□□ 0.71
SSC4D-201ENST00000275560 ZNF862O60290 1169 aa19.51■□□□□ 0.71
SSC4D-201ENST00000275560 HSD17B4P51659 736 aa19.51■□□□□ 0.71
SSC4D-201ENST00000275560 DSG1Q02413 1049 aa19.51■□□□□ 0.71
SSC4D-201ENST00000275560 BST1Q10588 318 aa19.51■□□□□ 0.71
SSC4D-201ENST00000275560 BMPR2Q13873 1038 aa19.51■□□□□ 0.71
SSC4D-201ENST00000275560 TAF5Q15542 800 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms