RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 ZKSCAN3Q9BRR0 538 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 TRABDQ9H4I3 376 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 GPR108Q9NPR9 543 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 THAP1Q9NVV9 213 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 NINJ2Q9NZG7 142 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 TBC1D14Q9P2M4 693 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 AGO2Q9UKV8 859 aaKnown RBP9.63□□□□□ -0.87
PDGFC-201ENST00000274071 RAB26Q9ULW5 256 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 CORINQ9Y5Q5 1042 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 FAM170AA1A519 330 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 PSMD11O00231 422 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 TOM1O60784 492 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 CIAO1O76071 339 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 CYP1A2P05177 515 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 DLDP09622 509 aaKnown RBP9.63□□□□□ -0.87
PDGFC-201ENST00000274071 RAG1P15918 1043 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 CTNNA2P26232 953 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 ALDH1A3P47895 512 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 HNRNPFP52597 415 aaKnown RBP9.63□□□□□ -0.87
PDGFC-201ENST00000274071 IST1P53990 364 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 ASIC1P78348 528 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 SELENBP1Q13228 472 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 ITGADQ13349 1161 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 PDK1Q15118 436 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 TJAP1Q5JTD0 557 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 RHBDF2Q6PJF5 856 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 LVRNQ6Q4G3 990 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 LRRC55Q6ZSA7 311 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 GPR180Q86V85 440 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 ZNF276Q8N554 614 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 C4orf32Q8N8J7 132 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 PWWP2AQ96N64 755 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 SEZ6LQ9BYH1 1024 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 KANSL2Q9H9L4 492 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 TYW1Q9NV66 732 aaKnown RBP9.63□□□□□ -0.87
PDGFC-201ENST00000274071 C6orf203Q9P0P8 240 aaPredicted RBP9.63□□□□□ -0.87
PDGFC-201ENST00000274071 NID2Q14112 1375 aa9.63□□□□□ -0.87
PDGFC-201ENST00000274071 DCAF8L1A6NGE4 600 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 AP3B1O00203 1094 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 PSMD12O00232 456 aaPredicted RBP9.62□□□□□ -0.87
PDGFC-201ENST00000274071 ARL4CP56559 192 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 OASLQ15646 514 aaKnown RBP9.62□□□□□ -0.87
PDGFC-201ENST00000274071 C15orf59Q2T9L4 293 aaPredicted RBP9.62□□□□□ -0.87
PDGFC-201ENST00000274071 TRIM16LQ309B1 348 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 Q3C1V9 767 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 DNAL1Q4LDG9 190 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 MDH1BQ5I0G3 518 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 RABGAP1LQ5R372 815 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 PIK3AP1Q6ZUJ8 805 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 ALYREFQ86V81 257 aaKnown RBP9.62□□□□□ -0.87
PDGFC-201ENST00000274071 GRIN3AQ8TCU5 1115 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 CAPSLQ8WWF8 208 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 ZNF512Q96ME7 567 aaPredicted RBP9.62□□□□□ -0.87
PDGFC-201ENST00000274071 AS3MTQ9HBK9 375 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 EXOC7Q9UPT5 735 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 FRMPD4Q14CM0 1322 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 LRP6O75581 1613 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 CENPBD1B2RD01 187 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 XPO1O14980 1071 aaKnown RBP9.62□□□□□ -0.87
PDGFC-201ENST00000274071 MYO1DO94832 1006 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 SORBS2O94875 1100 aaKnown RBP9.62□□□□□ -0.87
PDGFC-201ENST00000274071 CXCR2P25025 360 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 IREB2P48200 963 aaKnown RBP9.62□□□□□ -0.87
PDGFC-201ENST00000274071 THOP1P52888 689 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 CHD4Q14839 1912 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 DLGAP5Q15398 846 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 FAM91A1Q658Y4 838 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 MAMSTRQ6ZN01 415 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 TTC30BQ8N4P2 665 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 ENAHQ8N8S7 591 aaPredicted RBP9.62□□□□□ -0.87
PDGFC-201ENST00000274071 HIPK4Q8NE63 616 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 SLC35G2Q8TBE7 412 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 JDP2Q8WYK2 163 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 C12orf43Q96C57 262 aaKnown RBP9.62□□□□□ -0.87
PDGFC-201ENST00000274071 ISOC1Q96CN7 298 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 WNK4Q96J92 1243 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 HERC2P3Q9BVR0 1158 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 RNF26Q9BY78 433 aaPredicted RBP9.62□□□□□ -0.87
PDGFC-201ENST00000274071 KIAA1586Q9HCI6 787 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 ZNF304Q9HCX3 659 aa9.62□□□□□ -0.87
PDGFC-201ENST00000274071 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.62□□□□□ -0.87
PDGFC-201ENST00000274071 SMG5Q9UPR3 1016 aaKnown RBP9.62□□□□□ -0.87
PDGFC-201ENST00000274071 ARHGAP42A6NI28 874 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 TYROBPO43914 113 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 PDE8AO60658 829 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 CCDC130P13994 396 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 ABCB4P21439 1286 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 CES1P23141 567 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 JAK1P23458 1154 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 RPA1P27694 616 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 ZAP70P43403 619 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 CHRNEQ04844 493 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 PPATQ06203 517 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 PKN2Q16513 984 aaKnown RBP9.61□□□□□ -0.87
PDGFC-201ENST00000274071 CEP78Q5JTW2 689 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 GJC2Q5T442 439 aaPredicted RBP9.61□□□□□ -0.87
PDGFC-201ENST00000274071 RNF19BQ6ZMZ0 732 aa9.61□□□□□ -0.87
PDGFC-201ENST00000274071 CYP4V2Q6ZWL3 525 aaPredicted RBP9.61□□□□□ -0.87
PDGFC-201ENST00000274071 MARCH10Q8NA82 808 aaPredicted RBP9.61□□□□□ -0.87
PDGFC-201ENST00000274071 GLIS3Q8NEA6 775 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms