RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.24■□□□□ 0.031e-6■■□□□ 13.3
CNOT9-201ENST00000273064 OPHN1O60890 802 aa15.24■□□□□ 0.03
CNOT9-201ENST00000273064 CHRNB2P17787 502 aa15.24■□□□□ 0.03
CNOT9-201ENST00000273064 ELK3P41970 407 aa15.24■□□□□ 0.03
CNOT9-201ENST00000273064 RAD23BP54727 409 aa15.24■□□□□ 0.03
CNOT9-201ENST00000273064 JAM2P57087 298 aa15.24■□□□□ 0.03
CNOT9-201ENST00000273064 FKBP1AP62942 108 aaKnown RBP15.24■□□□□ 0.03
CNOT9-201ENST00000273064 AUHQ13825 339 aaKnown RBP15.24■□□□□ 0.03
CNOT9-201ENST00000273064 PCSK7Q16549 785 aa15.24■□□□□ 0.03
CNOT9-201ENST00000273064 DNAJB3Q8WWF6 145 aa15.24■□□□□ 0.03
CNOT9-201ENST00000273064 TMEM176AQ96HP8 235 aa15.24■□□□□ 0.03
CNOT9-201ENST00000273064 PHTF1Q9UMS5 762 aa15.24■□□□□ 0.03
CNOT9-201ENST00000273064 CICQ96RK0 1608 aaPredicted RBP15.24■□□□□ 0.03
CNOT9-201ENST00000273064 AVILO75366 819 aa15.24■□□□□ 0.03
CNOT9-201ENST00000273064 BRSK2Q8IWQ3 736 aa15.24■□□□□ 0.03
CNOT9-201ENST00000273064 EDEM1Q92611 657 aa15.24■□□□□ 0.03
CNOT9-201ENST00000273064 ABCC6O95255 1503 aa15.24■□□□□ 0.03
CNOT9-201ENST00000273064 M0QYT0 321 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 NCAM1P13591 858 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 TGFB2P61812 414 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 SNRPFP62306 86 aaKnown RBP15.23■□□□□ 0.03
CNOT9-201ENST00000273064 SP2Q02086 613 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 EFHC2Q5JST6 749 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 RSPH3Q86UC2 560 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 METTL23Q86XA0 190 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 TMEM130Q8N3G9 435 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 BHMTQ93088 406 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 KLRG1Q96E93 195 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 PAFAH2Q99487 392 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 B3GNT5Q9BYG0 378 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 CPSF2Q9P2I0 782 aaKnown RBP15.23■□□□□ 0.03
CNOT9-201ENST00000273064 TRIM33Q9UPN9 1127 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 PRG3Q9Y2Y8 225 aaPredicted RBP15.23■□□□□ 0.03
CNOT9-201ENST00000273064 DHX15O43143 795 aaKnown RBP15.23■□□□□ 0.03
CNOT9-201ENST00000273064 DCTN3O75935 186 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 TCF4P15884 667 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 GARSP41250 739 aaKnown RBP15.23■□□□□ 0.03
CNOT9-201ENST00000273064 HUNKP57058 714 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 BEX3Q00994 111 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 CENPCQ03188 943 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 FOXD4Q12950 439 aaPredicted RBP15.23■□□□□ 0.03
CNOT9-201ENST00000273064 FASTKD3Q14CZ7 662 aaKnown RBP15.23■□□□□ 0.03
CNOT9-201ENST00000273064 MMEL1Q495T6 779 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 NIPA1Q7RTP0 329 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 CCT6BQ92526 530 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 SERPINB12Q96P63 405 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 SPON2Q9BUD6 331 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 GPRC5DQ9NZD1 345 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 TJP2Q9UDY2 1190 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 ZNF541Q9H0D2 1346 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 ALS2Q96Q42 1657 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 B3GAT3O94766 335 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 ADORA2AP29274 412 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 NOMO3P69849 1222 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 DCAF12L1Q5VU92 463 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 WDR49Q8IV35 697 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 PPIL6Q8IXY8 311 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 HDAC11Q96DB2 347 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 RSAD1Q9HA92 442 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 DMAC2Q9NW81 257 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 STAP1Q9ULZ2 295 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 SLIT2O94813 1529 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 ADAMTSL3P82987 1691 aa15.23■□□□□ 0.03
CNOT9-201ENST00000273064 GIPC1O14908 333 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 PSTPIP1O43586 416 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 TRAPPC3O43617 180 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 SLC25A27O95847 323 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 PYGBP11216 843 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 KCNA2P16389 499 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 THOC5Q13769 683 aaKnown RBP15.22■□□□□ 0.03
CNOT9-201ENST00000273064 WDR75Q8IWA0 830 aaKnown RBP15.22■□□□□ 0.03
CNOT9-201ENST00000273064 SPOCK2Q92563 424 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 APOBEC3GQ9HC16 384 aaKnown RBP15.22■□□□□ 0.03
CNOT9-201ENST00000273064 BFARQ9NZS9 450 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 BTBD7Q9P203 1132 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 NR2E3Q9Y5X4 410 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 PLIN4Q96Q06 1357 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 CELF2O95319 508 aaKnown RBP15.22■□□□□ 0.03
CNOT9-201ENST00000273064 DEUP1Q05D60 604 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 EXOC3L1Q86VI1 746 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 GBP7Q8N8V2 638 aaPredicted RBP15.22■□□□□ 0.03
CNOT9-201ENST00000273064 PRCCQ92733 491 aaPredicted RBP15.22■□□□□ 0.03
CNOT9-201ENST00000273064 ROPN1BQ9BZX4 212 aaPredicted RBP15.22■□□□□ 0.03
CNOT9-201ENST00000273064 ROPN1Q9HAT0 212 aaPredicted RBP15.22■□□□□ 0.03
CNOT9-201ENST00000273064 PFDN4Q9NQP4 134 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 WHRNQ9P202 907 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 WDR35Q9P2L0 1181 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 ZNF536O15090 1300 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 AMPD1P23109 780 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 ADRA1DP25100 572 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 ABHD15Q6UXT9 468 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 TMEM192Q8IY95 271 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 NDRG1Q92597 394 aaKnown RBP15.22■□□□□ 0.03
CNOT9-201ENST00000273064 MBOAT7Q96N66 472 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 RNPEPQ9H4A4 650 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 DDIT4Q9NX09 232 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 NOP53Q9NZM5 478 aaKnown RBP15.22■□□□□ 0.03
CNOT9-201ENST00000273064 TRPM3Q9HCF6 1732 aaPredicted RBP15.22■□□□□ 0.03
CNOT9-201ENST00000273064 MAGEB2O15479 319 aa15.22■□□□□ 0.03
CNOT9-201ENST00000273064 MICAL2O94851 1124 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms