RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 ZNF846Q147U1 533 aa16.33■□□□□ 0.21
UBR3-201ENST00000272793 NECAB2Q7Z6G3 386 aa16.33■□□□□ 0.21
UBR3-201ENST00000272793 GPRASP2Q96D09 838 aa16.33■□□□□ 0.21
UBR3-201ENST00000272793 BTBD9Q96Q07 612 aa16.33■□□□□ 0.21
UBR3-201ENST00000272793 IL1RAPL1Q9NZN1 696 aa16.33■□□□□ 0.21
UBR3-201ENST00000272793 TNNI3P19429 210 aa16.33■□□□□ 0.21
UBR3-201ENST00000272793 AVPR1AP37288 418 aa16.33■□□□□ 0.21
UBR3-201ENST00000272793 CIDEBQ9UHD4 219 aa16.33■□□□□ 0.21
UBR3-201ENST00000272793 C3orf70A6NLC5 250 aaPredicted RBP16.33■□□□□ 0.2
UBR3-201ENST00000272793 ACSL4O60488 711 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 NPR2P20594 1047 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 VHLP40337 213 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 CPA2P48052 419 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 TTC39BQ5VTQ0 682 aaPredicted RBP16.33■□□□□ 0.2
UBR3-201ENST00000272793 ZC3H10Q96K80 434 aaKnown RBP16.33■□□□□ 0.2
UBR3-201ENST00000272793 MLXQ9UH92 298 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 EIF3LQ9Y262 564 aaKnown RBP16.33■□□□□ 0.2
UBR3-201ENST00000272793 F8VZ95 297 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 TTLL1O95922 423 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 C21orf59P57076 290 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 UGT3A1Q6NUS8 523 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 MINDY2Q8NBR6 621 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 MED8Q96G25 268 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 PAGE5Q96GU1 130 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 WNT8AQ9H1J5 351 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 ERBB3P21860 1342 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 PTGES3LE9PB15 166 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 MSL3P1P0C860 447 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 PABPC1P11940 636 aaKnown RBP16.33■□□□□ 0.2
UBR3-201ENST00000272793 GCKRQ14397 625 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 AGGF1Q8N302 714 aaeCLIP16.33■□□□□ 0.2
UBR3-201ENST00000272793 MYO3BQ8WXR4 1341 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 NCF1BA6NI72 391 aaPredicted RBP16.33■□□□□ 0.2
UBR3-201ENST00000272793 NCF1CA8MVU1 366 aaPredicted RBP16.33■□□□□ 0.2
UBR3-201ENST00000272793 HIST1H2ABP04908 130 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 NCF1P14598 390 aaPredicted RBP16.33■□□□□ 0.2
UBR3-201ENST00000272793 UBE2SQ16763 222 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 CYFIP1Q7L576 1253 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 HIST3H2AQ7L7L0 130 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 HIST1H2ACQ93077 130 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 CDY2AQ9Y6F7 541 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 CDY1Q9Y6F8 540 aa16.33■□□□□ 0.2
UBR3-201ENST00000272793 TBX3O15119 743 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 CHN1P15882 459 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 NKX1-1Q15270 411 aaPredicted RBP16.32■□□□□ 0.2
UBR3-201ENST00000272793 CDKL3Q8IVW4 592 aaPredicted RBP16.32■□□□□ 0.2
UBR3-201ENST00000272793 SLC25A41Q8N5S1 370 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 PIGOQ8TEQ8 1089 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 TOPORSQ9NS56 1045 aaPredicted RBP16.32■□□□□ 0.2
UBR3-201ENST00000272793 CMTM6Q9NX76 183 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 DUSP12Q9UNI6 340 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 MRPS7Q9Y2R9 242 aaKnown RBP16.32■□□□□ 0.2
UBR3-201ENST00000272793 MAGEA13PA6NCF6 341 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 PRRG1O14668 218 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 ZNF185O15231 689 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 SFNP31947 248 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 ITGA1P56199 1179 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 KCNT1Q5JUK3 1230 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 TMEM35BQ8NCS4 154 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 KBTBD7Q8WVZ9 684 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 AMNQ9BXJ7 453 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 NMRK2Q9NPI5 230 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 PFDN2Q9UHV9 154 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 STX5Q13190 355 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 NEDD8Q15843 81 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 DDX18Q9NVP1 670 aaKnown RBP16.32■□□□□ 0.2
UBR3-201ENST00000272793 ABI2Q9NYB9 513 aaPredicted RBP16.32■□□□□ 0.2
UBR3-201ENST00000272793 TSPAN4O14817 238 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 MYL12BO14950 172 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 AHCYL1O43865 530 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 THNSL1Q8IYQ7 743 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 CKAP2Q8WWK9 683 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 LIMA1Q9UHB6 759 aaKnown RBP16.32■□□□□ 0.2
UBR3-201ENST00000272793 USP15Q9Y4E8 981 aaPredicted RBP16.32■□□□□ 0.2
UBR3-201ENST00000272793 PSMD3O43242 534 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 SFSWAPQ12872 951 aaKnown RBP16.32■□□□□ 0.2
UBR3-201ENST00000272793 EID3Q8N140 333 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 SPATA18Q8TC71 538 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 PABPC5Q96DU9 382 aaKnown RBP16.32■□□□□ 0.2
UBR3-201ENST00000272793 NFKBIZQ9BYH8 718 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 LCMT1Q9UIC8 334 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 LYVE1Q9Y5Y7 322 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 STIP1P31948 543 aaKnown RBP16.32■□□□□ 0.2
UBR3-201ENST00000272793 IL2P60568 153 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 PURAQ00577 322 aaKnown RBP16.32■□□□□ 0.2
UBR3-201ENST00000272793 LONRF1Q17RB8 773 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 KIRREL3Q8IZU9 778 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 STK33Q9BYT3 514 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 KLHL4Q9C0H6 718 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 BPNT1O95861 308 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 AKR1B1P15121 316 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 SULT1E1P49888 294 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 ZNF200P98182 395 aaPredicted RBP16.32■□□□□ 0.2
UBR3-201ENST00000272793 NFYCQ13952 458 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 OASLQ15646 514 aaKnown RBP16.32■□□□□ 0.2
UBR3-201ENST00000272793 TMC4Q7Z404 712 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 ANKFN1Q8N957 763 aa16.32■□□□□ 0.2
UBR3-201ENST00000272793 USP27XA6NNY8 438 aa16.31■□□□□ 0.2
UBR3-201ENST00000272793 RGS12O14924 1447 aa16.31■□□□□ 0.2
UBR3-201ENST00000272793 STXBP1P61764 594 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms