RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 RNF186Q9NXI6 227 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 GRIN2DO15399 1336 aa17.51■□□□□ 0.39
CCDC40-201ENST00000269318 hCG_1818297A0A087WSY0 165 aa17.5■□□□□ 0.39
CCDC40-201ENST00000269318 A8MXQ7 604 aa17.5■□□□□ 0.39
CCDC40-201ENST00000269318 TP73O15350 636 aa17.5■□□□□ 0.39
CCDC40-201ENST00000269318 CTSHP09668 335 aa17.5■□□□□ 0.39
CCDC40-201ENST00000269318 PRKAR2AP13861 404 aaKnown RBP17.5■□□□□ 0.39
CCDC40-201ENST00000269318 CST5P28325 142 aaPredicted RBP17.5■□□□□ 0.39
CCDC40-201ENST00000269318 CDKN2BP42772 138 aa17.5■□□□□ 0.39
CCDC40-201ENST00000269318 ACAP1Q15027 740 aa17.5■□□□□ 0.39
CCDC40-201ENST00000269318 PPP1R7Q15435 360 aa17.5■□□□□ 0.39
CCDC40-201ENST00000269318 KCNA10Q16322 511 aa17.5■□□□□ 0.39
CCDC40-201ENST00000269318 FAM47CQ5HY64 1035 aa17.5■□□□□ 0.39
CCDC40-201ENST00000269318 TRNP1Q6NT89 227 aa17.5■□□□□ 0.39
CCDC40-201ENST00000269318 GOLGA6L1Q8N7Z2 621 aa17.5■□□□□ 0.39
CCDC40-201ENST00000269318 PIWIL1Q96J94 861 aaKnown RBP17.5■□□□□ 0.39
CCDC40-201ENST00000269318 ZFP42Q96MM3 310 aa17.5■□□□□ 0.39
CCDC40-201ENST00000269318 FAM129AQ9BZQ8 928 aa17.5■□□□□ 0.39
CCDC40-201ENST00000269318 CHST12Q9NRB3 414 aa17.5■□□□□ 0.39
CCDC40-201ENST00000269318 PSD3Q9NYI0 1048 aa17.5■□□□□ 0.39
CCDC40-201ENST00000269318 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.5■□□□□ 0.39
CCDC40-201ENST00000269318 FEZ2Q9UHY8 353 aaPredicted RBP17.5■□□□□ 0.39
CCDC40-201ENST00000269318 MEIS3P2A8K0S8 358 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 TJP3O95049 919 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 RPLP2P05387 115 aaKnown RBP17.49■□□□□ 0.39
CCDC40-201ENST00000269318 KRT7P08729 469 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 ELNP15502 786 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 IVDP26440 423 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 ZNF143P52747 638 aaPredicted RBP17.49■□□□□ 0.39
CCDC40-201ENST00000269318 LILRA4P59901 499 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 SP3Q02447 781 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 SV2CQ496J9 727 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 TFDP3Q5H9I0 405 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 ZNF618Q5T7W0 954 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 TMEM110Q86TL2 294 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 GSTCDQ8NEC7 633 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 LPIN3Q9BQK8 851 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 FAM105AQ9NUU6 356 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 GOLGA6CA6NDK9 693 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 C2CD4BA6NLJ0 364 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 PIK3R2O00459 728 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 GABBR2O75899 941 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 GOLGA6DP0CG33 693 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 LMO2P25791 158 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 GNL1P36915 607 aaPredicted RBP17.49■□□□□ 0.39
CCDC40-201ENST00000269318 DMTNQ08495 405 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 TAZQ16635 292 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 ZFYVE27Q5T4F4 411 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 DRICH1Q6PGQ1 229 aaPredicted RBP17.49■□□□□ 0.39
CCDC40-201ENST00000269318 OLFML1Q6UWY5 402 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 STK32AQ8WU08 396 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 FAM118BQ9BPY3 351 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 EPB41L4BQ9H329 900 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 GOLGA6AQ9NYA3 693 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 WHRNQ9P202 907 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 DNAH12Q6ZR08 3092 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 THSD7BQ9C0I4 1608 aa17.49■□□□□ 0.39
CCDC40-201ENST00000269318 LRRD1A4D1F6 860 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 GAS8O95995 478 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 RGS7P49802 495 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 PDE4CQ08493 712 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 HADHQ16836 314 aaKnown RBP17.48■□□□□ 0.39
CCDC40-201ENST00000269318 KAZNQ674X7 775 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 OR6B2Q6IFH4 312 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 APPL2Q8NEU8 664 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 UBLCP1Q8WVY7 318 aaPredicted RBP17.48■□□□□ 0.39
CCDC40-201ENST00000269318 OSBPL7Q9BZF2 842 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 AGO3Q9H9G7 860 aaKnown RBP17.48■□□□□ 0.39
CCDC40-201ENST00000269318 ATP8A1Q9Y2Q0 1164 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 LIASO43766 372 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 PDGFRBP09619 1106 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 GPD1P21695 349 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 MIPP30301 263 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 PCK1P35558 622 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 ZNF844Q08AG5 666 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 SMTNL2Q2TAL5 461 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 TOP6BLQ8N6T0 577 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 KHSRPQ92945 711 aaKnown RBP eCLIP17.48■□□□□ 0.39
CCDC40-201ENST00000269318 CCDC114Q96M63 670 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 CNPY3Q9BT09 278 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 ZWILCHQ9H900 591 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 ASNSD1Q9NWL6 643 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 HESX1Q9UBX0 185 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 MTRF1LQ9UGC7 380 aaKnown RBP17.48■□□□□ 0.39
CCDC40-201ENST00000269318 EFR3BQ9Y2G0 817 aa17.48■□□□□ 0.39
CCDC40-201ENST00000269318 CCDC130P13994 396 aa17.47■□□□□ 0.39
CCDC40-201ENST00000269318 WARSP23381 471 aaKnown RBP17.47■□□□□ 0.39
CCDC40-201ENST00000269318 RPL34P49207 117 aaKnown RBP17.47■□□□□ 0.39
CCDC40-201ENST00000269318 PTGISQ16647 500 aa17.47■□□□□ 0.39
CCDC40-201ENST00000269318 ODF2Q5BJF6 829 aa17.47■□□□□ 0.39
CCDC40-201ENST00000269318 KCNT1Q5JUK3 1230 aa17.47■□□□□ 0.39
CCDC40-201ENST00000269318 MAP3K21Q5TCX8 1036 aa17.47■□□□□ 0.39
CCDC40-201ENST00000269318 RHBDF2Q6PJF5 856 aa17.47■□□□□ 0.39
CCDC40-201ENST00000269318 ADGRF2Q8IZF7 708 aa17.47■□□□□ 0.39
CCDC40-201ENST00000269318 ANKRD52Q8NB46 1076 aa17.47■□□□□ 0.39
CCDC40-201ENST00000269318 CMASQ8NFW8 434 aaPredicted RBP17.47■□□□□ 0.39
CCDC40-201ENST00000269318 OR2W6PQ8NHA6 318 aa17.47■□□□□ 0.39
CCDC40-201ENST00000269318 RXFP2Q8WXD0 754 aa17.47■□□□□ 0.39
CCDC40-201ENST00000269318 SNX25Q9H3E2 840 aa17.47■□□□□ 0.39
CCDC40-201ENST00000269318 ASIC3Q9UHC3 531 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms