RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 MAGED4Q96JG8 741 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 TRIM8Q9BZR9 551 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 IL25Q9H293 177 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 VTA1Q9NP79 307 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 NSMCE4AQ9NXX6 385 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 CHKBQ9Y259 395 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 KPNA7A9QM74 516 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 GSC2O15499 205 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 FARP2O94887 1054 aaPredicted RBP11.07□□□□□ -0.64
KPNA3-201ENST00000261667 CSPG5O95196 566 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 SEC24AO95486 1093 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 GEMIN4P57678 1058 aaKnown RBP11.07□□□□□ -0.64
KPNA3-201ENST00000261667 TCIRG1Q13488 830 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 ZNF423Q2M1K9 1284 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 KLHDC7AQ5VTJ3 777 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 C4orf22Q6V702 233 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 USP49Q70CQ1 688 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 SNX32Q86XE0 403 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 MTMR8Q96EF0 704 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 ZSCAN5AQ9BUG6 496 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 WDR12Q9GZL7 423 aaKnown RBP11.07□□□□□ -0.64
KPNA3-201ENST00000261667 MBD2Q9UBB5 411 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 TRMT112Q9UI30 125 aaKnown RBP11.07□□□□□ -0.64
KPNA3-201ENST00000261667 WASF2Q9Y6W5 498 aa11.07□□□□□ -0.64
KPNA3-201ENST00000261667 COL14A1Q05707 1796 aaKnown RBP11.07□□□□□ -0.64
KPNA3-201ENST00000261667 MTRF1O75570 445 aaKnown RBP11.06□□□□□ -0.64
KPNA3-201ENST00000261667 PRKCBP05771 671 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 TFPTP0C1Z6 253 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 ENDOUP21128 410 aaKnown RBP11.06□□□□□ -0.64
KPNA3-201ENST00000261667 NAMPTP43490 491 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 GPC5P78333 572 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 MRPS22P82650 360 aaKnown RBP11.06□□□□□ -0.64
KPNA3-201ENST00000261667 NEDD1Q8NHV4 660 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 S100ZQ8WXG8 99 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 AS3MTQ9HBK9 375 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 SLC38A10Q9HBR0 1119 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 FBXO28Q9NVF7 368 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 INO80B-WBP1J3KQ70 363 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 FOXP2O15409 715 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 CRYZL1O95825 349 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 NAT2P11245 290 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 MMP13P45452 471 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 KPNA1P52294 538 aaPredicted RBP11.06□□□□□ -0.64
KPNA3-201ENST00000261667 XIAPP98170 497 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 HIF1AQ16665 826 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 NADK2Q4G0N4 442 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 FAM228AQ86W67 206 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 ZSWIM2Q8NEG5 633 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 SCFD1Q8WVM8 642 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 GINS4Q9BRT9 223 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 SCN3BQ9NY72 215 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 SLAIN2Q9P270 581 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 NEU2Q9Y3R4 380 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 SOX11P35716 441 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 SLC12A1Q13621 1099 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 CTC1Q2NKJ3 1217 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 SPANXN2Q5MJ10 180 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 ANKRD40Q6AI12 368 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 KLHL35Q6PF15 583 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 KLHL17Q6TDP4 642 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 CYB5R4Q7L1T6 521 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 MINDY2Q8NBR6 621 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 ACTRT1Q8TDG2 376 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 DGCR6LQ9BY27 220 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 CACNA2D2Q9NY47 1150 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 ZNF219Q9P2Y4 722 aaPredicted RBP11.06□□□□□ -0.64
KPNA3-201ENST00000261667 SYNPO2Q9UMS6 1093 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 ZNF652Q9Y2D9 606 aa11.06□□□□□ -0.64
KPNA3-201ENST00000261667 C5orf60A6NFR6 353 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 TRIM64A6NGJ6 449 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 TRIM64BA6NI03 449 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 DCDC2CA8MYV0 355 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 PROCP04070 461 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 C4BPBP20851 252 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 CDK16Q00536 496 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 MYL7Q01449 175 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 SLC9A5Q14940 896 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 SUZ12Q15022 739 aaKnown RBP11.05□□□□□ -0.64
KPNA3-201ENST00000261667 MAPRE2Q15555 327 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 ECHDC2Q86YB7 292 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 RFX6Q8HWS3 928 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 RHPN2Q8IUC4 686 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 CENPSQ8N2Z9 138 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 C18orf8Q96DM3 657 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 COG4Q9H9E3 785 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 FKBP14Q9NWM8 211 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 ANAPC7Q9UJX3 599 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 PPME1Q9Y570 386 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 MAGEB6P1A0A0J9YX57 407 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 UBAP1LF5GYI3 381 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 IDO1P14902 403 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 NR4A1P22736 598 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 ENTPD1P49961 510 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 GALCP54803 685 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 VAC14Q08AM6 782 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 TMEM62Q0P6H9 643 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 PABPC4Q13310 644 aaKnown RBP eCLIP11.05□□□□□ -0.64
KPNA3-201ENST00000261667 PARP10Q53GL7 1025 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 NIPAL1Q6NVV3 410 aa11.05□□□□□ -0.64
KPNA3-201ENST00000261667 LAYNQ6UX15 382 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms