RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 CYP4A22Q5TCH4 519 aa17.82■□□□□ 0.44
SDCBP-201ENST00000260130 VSTM1Q6UX27 236 aa17.82■□□□□ 0.44
SDCBP-201ENST00000260130 PDZD4Q76G19 769 aaPredicted RBP17.82■□□□□ 0.44
SDCBP-201ENST00000260130 GET4Q7L5D6 327 aaPredicted RBP17.82■□□□□ 0.44
SDCBP-201ENST00000260130 HS6ST3Q8IZP7 471 aa17.82■□□□□ 0.44
SDCBP-201ENST00000260130 LEMD2Q8NC56 503 aa17.82■□□□□ 0.44
SDCBP-201ENST00000260130 GIPC2Q8TF65 315 aa17.82■□□□□ 0.44
SDCBP-201ENST00000260130 NT5C1BQ96P26 610 aa17.82■□□□□ 0.44
SDCBP-201ENST00000260130 TUBGCP2Q9BSJ2 902 aa17.82■□□□□ 0.44
SDCBP-201ENST00000260130 NT5C1AQ9BXI3 368 aa17.82■□□□□ 0.44
SDCBP-201ENST00000260130 ASAH2Q9NR71 780 aa17.82■□□□□ 0.44
SDCBP-201ENST00000260130 CISHQ9NSE2 258 aa17.82■□□□□ 0.44
SDCBP-201ENST00000260130 MRPS23Q9Y3D9 190 aaKnown RBP17.82■□□□□ 0.44
SDCBP-201ENST00000260130 TTC28Q96AY4 2481 aa17.82■□□□□ 0.44
SDCBP-201ENST00000260130 TRIM21P19474 475 aaKnown RBP17.81■□□□□ 0.44
SDCBP-201ENST00000260130 EEF1GP26641 437 aaKnown RBP17.81■□□□□ 0.44
SDCBP-201ENST00000260130 CBX1P83916 185 aa17.81■□□□□ 0.44
SDCBP-201ENST00000260130 MYL5Q02045 173 aa17.81■□□□□ 0.44
SDCBP-201ENST00000260130 ORC1Q13415 861 aa17.81■□□□□ 0.44
SDCBP-201ENST00000260130 TCP11X2Q5H9J9 407 aa17.81■□□□□ 0.44
SDCBP-201ENST00000260130 ITFG1Q8TB96 612 aa17.81■□□□□ 0.44
SDCBP-201ENST00000260130 WHAMMQ8TF30 809 aa17.81■□□□□ 0.44
SDCBP-201ENST00000260130 TWNKQ96RR1 684 aa17.81■□□□□ 0.44
SDCBP-201ENST00000260130 B3GNT5Q9BYG0 378 aa17.81■□□□□ 0.44
SDCBP-201ENST00000260130 FANCLQ9NW38 375 aa17.81■□□□□ 0.44
SDCBP-201ENST00000260130 ZNF197O14709 1029 aa17.81■□□□□ 0.44
SDCBP-201ENST00000260130 TBXAS1P24557 533 aaPredicted RBP17.81■□□□□ 0.44
SDCBP-201ENST00000260130 GPR15P49685 360 aa17.81■□□□□ 0.44
SDCBP-201ENST00000260130 EPHA5P54756 1037 aa17.81■□□□□ 0.44
SDCBP-201ENST00000260130 TAF12Q16514 161 aa17.81■□□□□ 0.44
SDCBP-201ENST00000260130 SLC5A9Q2M3M2 681 aa17.81■□□□□ 0.44
SDCBP-201ENST00000260130 SCN4BQ8IWT1 228 aa17.81■□□□□ 0.44
SDCBP-201ENST00000260130 ZDHHC14Q8IZN3 488 aa17.81■□□□□ 0.44
SDCBP-201ENST00000260130 GPR152Q8TDT2 470 aa17.81■□□□□ 0.44
SDCBP-201ENST00000260130 ZNF592Q92610 1267 aa17.81■□□□□ 0.44
SDCBP-201ENST00000260130 MYADMQ96S97 322 aa17.81■□□□□ 0.44
SDCBP-201ENST00000260130 DNAI2Q9GZS0 605 aa17.81■□□□□ 0.44
SDCBP-201ENST00000260130 NRDCO43847 1150 aa17.8■□□□□ 0.44
SDCBP-201ENST00000260130 GRIK1P39086 918 aa17.8■□□□□ 0.44
SDCBP-201ENST00000260130 VWA3BQ502W6 1294 aa17.8■□□□□ 0.44
SDCBP-201ENST00000260130 PRSS36Q5K4E3 855 aa17.8■□□□□ 0.44
SDCBP-201ENST00000260130 CDKAL1Q5VV42 579 aa17.8■□□□□ 0.44
SDCBP-201ENST00000260130 CCAR2Q8N163 923 aaKnown RBP17.8■□□□□ 0.44
SDCBP-201ENST00000260130 PPM1KQ8N3J5 372 aa17.8■□□□□ 0.44
SDCBP-201ENST00000260130 LRRC3Q9BY71 257 aa17.8■□□□□ 0.44
SDCBP-201ENST00000260130 ELOVL4Q9GZR5 314 aa17.8■□□□□ 0.44
SDCBP-201ENST00000260130 INTS2Q9H0H0 1204 aaKnown RBP17.8■□□□□ 0.44
SDCBP-201ENST00000260130 NDST4Q9H3R1 872 aa17.8■□□□□ 0.44
SDCBP-201ENST00000260130 GCNT4Q9P109 453 aa17.8■□□□□ 0.44
SDCBP-201ENST00000260130 ZFP37Q9Y6Q3 630 aaPredicted RBP17.8■□□□□ 0.44
SDCBP-201ENST00000260130 CLDN5O00501 218 aa17.8■□□□□ 0.44
SDCBP-201ENST00000260130 MYL4P12829 197 aa17.8■□□□□ 0.44
SDCBP-201ENST00000260130 ZNF394Q53GI3 561 aa17.8■□□□□ 0.44
SDCBP-201ENST00000260130 SDHAF4Q5VUM1 108 aa17.8■□□□□ 0.44
SDCBP-201ENST00000260130 RNF135Q8IUD6 432 aa17.8■□□□□ 0.44
SDCBP-201ENST00000260130 C12orf29Q8N999 325 aa17.8■□□□□ 0.44
SDCBP-201ENST00000260130 FGF13Q92913 245 aa17.8■□□□□ 0.44
SDCBP-201ENST00000260130 CRACR2AQ9BSW2 395 aa17.8■□□□□ 0.44
SDCBP-201ENST00000260130 ZNF518BQ9C0D4 1074 aa17.8■□□□□ 0.44
SDCBP-201ENST00000260130 CDH7Q9ULB5 785 aa17.8■□□□□ 0.44
SDCBP-201ENST00000260130 BDP1A6H8Y1 2624 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 GTPBP10A4D1E9 387 aaKnown RBP17.79■□□□□ 0.44
SDCBP-201ENST00000260130 USP27XA6NNY8 438 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 MICAL2O94851 1124 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 LAMP2P13473 410 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 CCR2P41597 374 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 YWHAEP62258 255 aaKnown RBP17.79■□□□□ 0.44
SDCBP-201ENST00000260130 MIIPQ5JXC2 388 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 GBP6Q6ZN66 633 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 PAQR9Q6ZVX9 377 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 TMC8Q8IU68 726 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 TCEAL4Q96EI5 215 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 MED10Q9BTT4 135 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 EPS15L1Q9UBC2 864 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 LIMD1Q9UGP4 676 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 DENND4AQ7Z401 1863 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 ATP8B3O60423 1300 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 TNFRSF10AO00220 468 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 CSH1P0DML2 217 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 CSH2P0DML3 217 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 NCAPHQ15003 741 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 EXOC3L4Q17RC7 722 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 PHLDB3Q6NSJ2 640 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 FUKQ8N0W3 1084 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 KIF18AQ8NI77 898 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 TMEM176AQ96HP8 235 aa17.79■□□□□ 0.44
SDCBP-201ENST00000260130 ZNF334Q9HCZ1 680 aaPredicted RBP17.79■□□□□ 0.44
SDCBP-201ENST00000260130 DLL1O00548 723 aa17.78■□□□□ 0.44
SDCBP-201ENST00000260130 TRIM66O15016 1216 aa17.78■□□□□ 0.44
SDCBP-201ENST00000260130 FGF19O95750 216 aa17.78■□□□□ 0.44
SDCBP-201ENST00000260130 CCDC130P13994 396 aa17.78■□□□□ 0.44
SDCBP-201ENST00000260130 HMGA1P17096 107 aaKnown RBP17.78■□□□□ 0.44
SDCBP-201ENST00000260130 ANXA13P27216 316 aa17.78■□□□□ 0.44
SDCBP-201ENST00000260130 GCNT1Q02742 428 aa17.78■□□□□ 0.44
SDCBP-201ENST00000260130 DMTNQ08495 405 aa17.78■□□□□ 0.44
SDCBP-201ENST00000260130 TRIM65Q6PJ69 517 aa17.78■□□□□ 0.44
SDCBP-201ENST00000260130 RRAGAQ7L523 313 aa17.78■□□□□ 0.44
SDCBP-201ENST00000260130 FAM35AQ86V20 835 aa17.78■□□□□ 0.44
SDCBP-201ENST00000260130 ARHGEF19Q8IW93 802 aa17.78■□□□□ 0.44
SDCBP-201ENST00000260130 NPAS3Q8IXF0 933 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms