RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 RTP2Q5QGT7 225 aa18.75■□□□□ 0.59
CCDC115-201ENST00000259229 LIN9Q5TKA1 542 aa18.75■□□□□ 0.59
CCDC115-201ENST00000259229 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.75■□□□□ 0.59
CCDC115-201ENST00000259229 CLEC20AQ6ZU45 233 aa18.75■□□□□ 0.59
CCDC115-201ENST00000259229 SLC39A11Q8N1S5 342 aa18.75■□□□□ 0.59
CCDC115-201ENST00000259229 C3orf20Q8ND61 904 aa18.75■□□□□ 0.59
CCDC115-201ENST00000259229 STK32AQ8WU08 396 aa18.75■□□□□ 0.59
CCDC115-201ENST00000259229 BTBD6Q96KE9 485 aa18.75■□□□□ 0.59
CCDC115-201ENST00000259229 NAPGQ99747 312 aaPredicted RBP18.75■□□□□ 0.59
CCDC115-201ENST00000259229 DUSP16Q9BY84 665 aa18.75■□□□□ 0.59
CCDC115-201ENST00000259229 ZCWPW1Q9H0M4 648 aa18.75■□□□□ 0.59
CCDC115-201ENST00000259229 FTCDO95954 541 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 NPR3P17342 541 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 PLA2G4AP47712 749 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 ALDH7A1P49419 539 aaKnown RBP18.74■□□□□ 0.59
CCDC115-201ENST00000259229 RGS7P49802 495 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 ELAVL2Q12926 359 aaKnown RBP18.74■□□□□ 0.59
CCDC115-201ENST00000259229 IFI16Q16666 785 aaKnown RBP18.74■□□□□ 0.59
CCDC115-201ENST00000259229 RASIP1Q5U651 963 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 C11orf63Q6NUN7 778 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 TMEM110Q86TL2 294 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 THEM5Q8N1Q8 247 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 COLGALT1Q8NBJ5 622 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 ZMIZ2Q8NF64 920 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 C18orf8Q96DM3 657 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 YME1L1Q96TA2 773 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 TLR10Q9BXR5 811 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 RHOBTB2Q9BYZ6 727 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 KRT82Q9NSB4 513 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 STRIP2Q9ULQ0 834 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 JRKLQ9Y4A0 524 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 CTAGE9A4FU28 777 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 XPO1O14980 1071 aaKnown RBP18.74■□□□□ 0.59
CCDC115-201ENST00000259229 OR4Q2P0C623 313 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 MEI1Q5TIA1 1274 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 PAPD7Q5XG87 772 aaKnown RBP18.74■□□□□ 0.59
CCDC115-201ENST00000259229 RSPO2Q6UXX9 243 aaPredicted RBP18.74■□□□□ 0.59
CCDC115-201ENST00000259229 CPNE8Q86YQ8 564 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 MCRS1Q96EZ8 462 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 PIWIL1Q96J94 861 aaKnown RBP18.74■□□□□ 0.59
CCDC115-201ENST00000259229 CALR3Q96L12 384 aaKnown RBP18.74■□□□□ 0.59
CCDC115-201ENST00000259229 ZNF558Q96NG5 402 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 SMOQ99835 787 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 SCINQ9Y6U3 715 aa18.74■□□□□ 0.59
CCDC115-201ENST00000259229 PLXNA4Q9HCM2 1894 aa18.73■□□□□ 0.59
CCDC115-201ENST00000259229 COL4A4P53420 1690 aaPredicted RBP18.73■□□□□ 0.59
CCDC115-201ENST00000259229 PIK3R2O00459 728 aa18.73■□□□□ 0.59
CCDC115-201ENST00000259229 NCK2O43639 380 aa18.73■□□□□ 0.59
CCDC115-201ENST00000259229 FAM200BP0CF97 657 aa18.73■□□□□ 0.59
CCDC115-201ENST00000259229 LAG3P18627 525 aa18.73■□□□□ 0.59
CCDC115-201ENST00000259229 RPL7AP62424 266 aaKnown RBP18.73■□□□□ 0.59
CCDC115-201ENST00000259229 ZNF252P-AS1Q0IIN9 211 aa18.73■□□□□ 0.59
CCDC115-201ENST00000259229 FAM183BPQ6ZVS7 135 aa18.73■□□□□ 0.59
CCDC115-201ENST00000259229 NT5DC3Q86UY8 548 aa18.73■□□□□ 0.59
CCDC115-201ENST00000259229 CEP57Q86XR8 500 aa18.73■□□□□ 0.59
CCDC115-201ENST00000259229 SP7Q8TDD2 431 aaPredicted RBP18.73■□□□□ 0.59
CCDC115-201ENST00000259229 SLC9A7Q96T83 725 aa18.73■□□□□ 0.59
CCDC115-201ENST00000259229 CSNK1G1Q9HCP0 422 aa18.73■□□□□ 0.59
CCDC115-201ENST00000259229 ST7Q9NRC1 585 aa18.73■□□□□ 0.59
CCDC115-201ENST00000259229 CHST7Q9NS84 486 aa18.73■□□□□ 0.59
CCDC115-201ENST00000259229 PARVAQ9NVD7 372 aa18.73■□□□□ 0.59
CCDC115-201ENST00000259229 ANAPC7Q9UJX3 599 aa18.73■□□□□ 0.59
CCDC115-201ENST00000259229 GBF1Q92538 1859 aa18.72■□□□□ 0.59
CCDC115-201ENST00000259229 CCDC85CA6NKD9 419 aa18.72■□□□□ 0.59
CCDC115-201ENST00000259229 PAPSS1O43252 624 aaPredicted RBP18.72■□□□□ 0.59
CCDC115-201ENST00000259229 TSPY1Q01534 308 aa18.72■□□□□ 0.59
CCDC115-201ENST00000259229 ZNF268Q14587 947 aaPredicted RBP18.72■□□□□ 0.59
CCDC115-201ENST00000259229 ZNF280DQ6N043 979 aa18.72■□□□□ 0.59
CCDC115-201ENST00000259229 DNAJC24Q6P3W2 148 aa18.72■□□□□ 0.59
CCDC115-201ENST00000259229 OLFML1Q6UWY5 402 aa18.72■□□□□ 0.59
CCDC115-201ENST00000259229 DAAM2Q86T65 1068 aa18.72■□□□□ 0.59
CCDC115-201ENST00000259229 PIGZQ86VD9 579 aa18.72■□□□□ 0.59
CCDC115-201ENST00000259229 HERC6Q8IVU3 1022 aa18.72■□□□□ 0.59
CCDC115-201ENST00000259229 MSANTD4Q8NCY6 345 aa18.72■□□□□ 0.59
CCDC115-201ENST00000259229 IPO4Q8TEX9 1081 aaKnown RBP18.72■□□□□ 0.59
CCDC115-201ENST00000259229 MED10Q9BTT4 135 aa18.72■□□□□ 0.59
CCDC115-201ENST00000259229 TTPALQ9BTX7 342 aa18.72■□□□□ 0.59
CCDC115-201ENST00000259229 MRPL47Q9HD33 250 aaKnown RBP18.72■□□□□ 0.59
CCDC115-201ENST00000259229 CYLDQ9NQC7 956 aa18.72■□□□□ 0.59
CCDC115-201ENST00000259229 WDR35Q9P2L0 1181 aa18.72■□□□□ 0.59
CCDC115-201ENST00000259229 PACSIN2Q9UNF0 486 aaPredicted RBP18.72■□□□□ 0.59
CCDC115-201ENST00000259229 HYOU1Q9Y4L1 999 aa18.72■□□□□ 0.59
CCDC115-201ENST00000259229 TMEM191CA6NGB0 347 aa18.71■□□□□ 0.59
CCDC115-201ENST00000259229 HHLA1C9JL84 531 aa18.71■□□□□ 0.59
CCDC115-201ENST00000259229 AP1G2O75843 785 aa18.71■□□□□ 0.59
CCDC115-201ENST00000259229 RABGGTBP53611 331 aa18.71■□□□□ 0.59
CCDC115-201ENST00000259229 OGDHQ02218 1023 aa18.71■□□□□ 0.59
CCDC115-201ENST00000259229 PTPROQ16827 1216 aa18.71■□□□□ 0.59
CCDC115-201ENST00000259229 CTXN3Q4LDR2 81 aa18.71■□□□□ 0.59
CCDC115-201ENST00000259229 JOSD2Q8TAC2 188 aa18.71■□□□□ 0.59
CCDC115-201ENST00000259229 FEZF2Q8TBJ5 459 aa18.71■□□□□ 0.59
CCDC115-201ENST00000259229 KCTD13Q8WZ19 329 aa18.71■□□□□ 0.59
CCDC115-201ENST00000259229 SMARCD1Q96GM5 515 aa18.71■□□□□ 0.59
CCDC115-201ENST00000259229 HSFY1Q96LI6 401 aa18.71■□□□□ 0.59
CCDC115-201ENST00000259229 MCEEQ96PE7 176 aa18.71■□□□□ 0.59
CCDC115-201ENST00000259229 KCNK16Q96T55 309 aa18.71■□□□□ 0.59
CCDC115-201ENST00000259229 L2HGDHQ9H9P8 463 aa18.71■□□□□ 0.59
CCDC115-201ENST00000259229 OR6C75A6NL08 312 aa18.71■□□□□ 0.58
CCDC115-201ENST00000259229 SIGLEC16A6NMB1 481 aa18.71■□□□□ 0.58
CCDC115-201ENST00000259229 GOLGA8SH3BPF8 625 aa18.71■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms