RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 TAF6P49848 677 aa18.48■□□□□ 0.55
SRSF1-201ENST00000258962 C1QBPQ07021 282 aaKnown RBP18.48■□□□□ 0.55
SRSF1-201ENST00000258962 PDE12Q6L8Q7 609 aaKnown RBP18.48■□□□□ 0.55
SRSF1-201ENST00000258962 C11orf63Q6NUN7 778 aa18.48■□□□□ 0.55
SRSF1-201ENST00000258962 PPP1R2P3Q6NXS1 205 aa18.48■□□□□ 0.55
SRSF1-201ENST00000258962 MMS22LQ6ZRQ5 1243 aa18.48■□□□□ 0.55
SRSF1-201ENST00000258962 RSRC2Q7L4I2 434 aaKnown RBP18.48■□□□□ 0.55
SRSF1-201ENST00000258962 PEX26Q7Z412 305 aa18.48■□□□□ 0.55
SRSF1-201ENST00000258962 LIMS2Q7Z4I7 341 aa18.48■□□□□ 0.55
SRSF1-201ENST00000258962 MTERF4Q7Z6M4 381 aaKnown RBP18.48■□□□□ 0.55
SRSF1-201ENST00000258962 VCPIP1Q96JH7 1222 aa18.48■□□□□ 0.55
SRSF1-201ENST00000258962 SLC38A7Q9NVC3 462 aa18.48■□□□□ 0.55
SRSF1-201ENST00000258962 ADAM22Q9P0K1 906 aa18.48■□□□□ 0.55
SRSF1-201ENST00000258962 COL4A4P53420 1690 aaPredicted RBP18.47■□□□□ 0.55
SRSF1-201ENST00000258962 KIAA1671Q9BY89 1806 aa18.47■□□□□ 0.55
SRSF1-201ENST00000258962 MED7O43513 233 aa18.47■□□□□ 0.55
SRSF1-201ENST00000258962 THP07101 528 aa18.47■□□□□ 0.55
SRSF1-201ENST00000258962 VDRP11473 427 aa18.47■□□□□ 0.55
SRSF1-201ENST00000258962 MMP8P22894 467 aa18.47■□□□□ 0.55
SRSF1-201ENST00000258962 IGFBP6P24592 240 aaPredicted RBP18.47■□□□□ 0.55
SRSF1-201ENST00000258962 DNA2P51530 1060 aa18.47■□□□□ 0.55
SRSF1-201ENST00000258962 CAMK1Q14012 370 aa18.47■□□□□ 0.55
SRSF1-201ENST00000258962 RPS6KA1Q15418 735 aa18.47■□□□□ 0.55
SRSF1-201ENST00000258962 ERCC6LQ2NKX8 1250 aa18.47■□□□□ 0.55
SRSF1-201ENST00000258962 SV2CQ496J9 727 aa18.47■□□□□ 0.55
SRSF1-201ENST00000258962 PHLDB2Q86SQ0 1253 aa18.47■□□□□ 0.55
SRSF1-201ENST00000258962 TMEM35BQ8NCS4 154 aa18.47■□□□□ 0.55
SRSF1-201ENST00000258962 KBTBD7Q8WVZ9 684 aa18.47■□□□□ 0.55
SRSF1-201ENST00000258962 HES6Q96HZ4 224 aa18.47■□□□□ 0.55
SRSF1-201ENST00000258962 IGSF21Q96ID5 467 aa18.47■□□□□ 0.55
SRSF1-201ENST00000258962 NT5C1AQ9BXI3 368 aa18.47■□□□□ 0.55
SRSF1-201ENST00000258962 ZNF518BQ9C0D4 1074 aa18.47■□□□□ 0.55
SRSF1-201ENST00000258962 LHX5Q9H2C1 402 aa18.47■□□□□ 0.55
SRSF1-201ENST00000258962 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.47■□□□□ 0.555e-6■■□□□ 11.8
SRSF1-201ENST00000258962 TSC2P49815 1807 aa18.46■□□□□ 0.55
SRSF1-201ENST00000258962 O00370 1275 aa18.46■□□□□ 0.55
SRSF1-201ENST00000258962 NRP1O14786 923 aa18.46■□□□□ 0.55
SRSF1-201ENST00000258962 MICAL2O94851 1124 aa18.46■□□□□ 0.55
SRSF1-201ENST00000258962 LILRA4P59901 499 aa18.46■□□□□ 0.55
SRSF1-201ENST00000258962 CKAP4Q07065 602 aaKnown RBP18.46■□□□□ 0.55
SRSF1-201ENST00000258962 DSC1Q08554 894 aa18.46■□□□□ 0.55
SRSF1-201ENST00000258962 ELF2Q15723 593 aa18.46■□□□□ 0.55
SRSF1-201ENST00000258962 TCEAL5Q5H9L2 206 aa18.46■□□□□ 0.55
SRSF1-201ENST00000258962 TMC7Q7Z402 723 aa18.46■□□□□ 0.55
SRSF1-201ENST00000258962 COLGALT2Q8IYK4 626 aa18.46■□□□□ 0.55
SRSF1-201ENST00000258962 BTBD6Q96KE9 485 aa18.46■□□□□ 0.55
SRSF1-201ENST00000258962 COLEC11Q9BWP8 271 aa18.46■□□□□ 0.55
SRSF1-201ENST00000258962 ENTPD7Q9NQZ7 604 aa18.46■□□□□ 0.55
SRSF1-201ENST00000258962 EHD2Q9NZN4 543 aa18.46■□□□□ 0.55
SRSF1-201ENST00000258962 STK39Q9UEW8 545 aa18.46■□□□□ 0.55
SRSF1-201ENST00000258962 CYTH4Q9UIA0 394 aa18.46■□□□□ 0.55
SRSF1-201ENST00000258962 AMFRQ9UKV5 643 aa18.46■□□□□ 0.55
SRSF1-201ENST00000258962 PRG3Q9Y2Y8 225 aaPredicted RBP18.46■□□□□ 0.55
SRSF1-201ENST00000258962 TRANK1O15050 2925 aa18.46■□□□□ 0.55
SRSF1-201ENST00000258962 CTAGE15A4D2H0 777 aa18.45■□□□□ 0.54
SRSF1-201ENST00000258962 TMEM110-MUSTN1A8MSY1 372 aa18.45■□□□□ 0.54
SRSF1-201ENST00000258962 DDX3YO15523 660 aaKnown RBP18.45■□□□□ 0.54
SRSF1-201ENST00000258962 HCRTO43612 131 aa18.45■□□□□ 0.54
SRSF1-201ENST00000258962 B4GALT3O60512 393 aa18.45■□□□□ 0.54
SRSF1-201ENST00000258962 CTAGE8P0CG41 777 aa18.45■□□□□ 0.54
SRSF1-201ENST00000258962 TUSC3Q13454 348 aa18.45■□□□□ 0.54
SRSF1-201ENST00000258962 CNGA2Q16280 664 aa18.45■□□□□ 0.54
SRSF1-201ENST00000258962 SGO2Q562F6 1265 aa18.45■□□□□ 0.54
SRSF1-201ENST00000258962 PLEKHA7Q6IQ23 1121 aa18.45■□□□□ 0.54
SRSF1-201ENST00000258962 CTAGE6Q86UF2 777 aa18.45■□□□□ 0.54
SRSF1-201ENST00000258962 CPNE8Q86YQ8 564 aa18.45■□□□□ 0.54
SRSF1-201ENST00000258962 CTAGE4Q8IX94 777 aa18.45■□□□□ 0.54
SRSF1-201ENST00000258962 HEXIM2Q96MH2 286 aaKnown RBP18.45■□□□□ 0.54
SRSF1-201ENST00000258962 TRIM7Q9C029 511 aa18.45■□□□□ 0.54
SRSF1-201ENST00000258962 NGRNQ9NPE2 291 aaKnown RBP18.45■□□□□ 0.54
SRSF1-201ENST00000258962 L1RE1Q9UN81 338 aa18.45■□□□□ 0.54
SRSF1-201ENST00000258962 ALG6Q9Y672 507 aa18.45■□□□□ 0.54
SRSF1-201ENST00000258962 TCRBV5S1A1TA0A578 114 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 IRS1P35568 1242 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 ERVFC1P60507 584 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 MESDQ14696 234 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 TEX35Q5T0J7 233 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 LIN9Q5TKA1 542 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 ZNF572Q7Z3I7 529 aaPredicted RBP18.44■□□□□ 0.54
SRSF1-201ENST00000258962 DDX53Q86TM3 631 aaKnown RBP18.44■□□□□ 0.54
SRSF1-201ENST00000258962 UNC93AQ86WB7 457 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 GOLGA1Q92805 767 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 MS4A14Q96JA4 679 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 TCF25Q9BQ70 676 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 SMARCAL1Q9NZC9 954 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 KIAA1257Q9ULG3 409 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 CEP83Q9Y592 693 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 PODXLO00592 558 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 CES2O00748 559 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 KCNK3O14649 394 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 CLCNKBP51801 687 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 MAMLD1Q13495 774 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 PTPN20Q4JDL3 420 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 ACOT1Q86TX2 421 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 TMEM173Q86WV6 379 aaPredicted RBP18.44■□□□□ 0.54
SRSF1-201ENST00000258962 VPS52Q8N1B4 723 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 TOP6BLQ8N6T0 577 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 C12orf29Q8N999 325 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 C3orf58Q8NDZ4 430 aa18.44■□□□□ 0.54
SRSF1-201ENST00000258962 OR6B3Q8NGW1 331 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms