RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 PTCH2Q9Y6C5 1203 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 ATP2A1O14983 1001 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 NCK2O43639 380 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 TFAP2AP05549 437 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 BDNFP23560 247 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 UBA7P41226 1012 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 PPP1R2P41236 205 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 CDK9P50750 372 aaKnown RBP12.38□□□□□ -0.43
CCNA1-201ENST00000255465 KCNMA1Q12791 1236 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 DNAJC3Q13217 504 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 RASA2Q15283 850 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 ASPRV1Q53RT3 343 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 TMTC4Q5T4D3 741 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 KRT40Q6A162 431 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 CGB2Q6NT52 195 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 UGT2A3Q6UWM9 527 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 VASH1Q7L8A9 365 aaPredicted RBP12.38□□□□□ -0.43
CCNA1-201ENST00000255465 PLEKHH3Q7Z736 793 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 RIOX2Q8IUF8 465 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 AHI1Q8N157 1196 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 RASGEF1CQ8N431 466 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 MINDY2Q8NBR6 621 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 TNIP2Q8NFZ5 429 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 LILRB4Q8NHJ6 448 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 CCDC127Q96BQ5 260 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 PITPNM3Q9BZ71 974 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 RAVER2Q9HCJ3 691 aaKnown RBP12.38□□□□□ -0.43
CCNA1-201ENST00000255465 STK39Q9UEW8 545 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 PPME1Q9Y570 386 aa12.38□□□□□ -0.43
CCNA1-201ENST00000255465 HTTP42858 3142 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 STK36Q9NRP7 1315 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 ZNF236Q9UL36 1845 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 SYCE1LA8MT33 242 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 BTBD18B2RXH4 712 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 H3BNX3 289 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 C2CD2LO14523 706 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 HAT1O14929 419 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 AREL1O15033 823 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 DAPK3O43293 454 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 SLC25A27O95847 323 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 ATICP31939 592 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 SLC18A1P54219 525 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 SNAP25P60880 206 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 IFI35P80217 286 aaPredicted RBP12.37□□□□□ -0.43
CCNA1-201ENST00000255465 IL9RQ01113 521 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 LRRC63Q05C16 580 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 TROAPQ12815 778 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 AUHQ13825 339 aaKnown RBP12.37□□□□□ -0.43
CCNA1-201ENST00000255465 KRT81Q14533 505 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 EPHA7Q15375 998 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 FAM91A1Q658Y4 838 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 CCDC62Q6P9F0 684 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 CCDC81Q6ZN84 652 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 FRA10AC1Q70Z53 315 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 WASF1Q92558 559 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 SYN2Q92777 582 aaPredicted RBP12.37□□□□□ -0.43
CCNA1-201ENST00000255465 LRGUKQ96M69 825 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 CFAP57Q96MR6 1250 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 PSD2Q9BQI7 771 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 ALG1Q9BT22 464 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 TEX13BQ9BXU2 312 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 CPVLQ9H3G5 476 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 MROH8Q9H579 483 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 DISC1Q9NRI5 854 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 HPS5Q9UPZ3 1129 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 RIPK3Q9Y572 518 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 SQORQ9Y6N5 450 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 CENPFP49454 3210 aa12.37□□□□□ -0.43
CCNA1-201ENST00000255465 TMEM120BA0PK00 339 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 DENRO43583 198 aaKnown RBP12.36□□□□□ -0.43
CCNA1-201ENST00000255465 OR6B1O95007 311 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 KRT75O95678 551 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 SLC5A2P31639 672 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 STX2P32856 288 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 OAZ1P54368 228 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 PDK3Q15120 406 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 RPS6KA1Q15418 735 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 MORN1Q5T089 497 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 C10orf76Q5T2E6 689 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 NDUFAF5Q5TEU4 345 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 RRAGBQ5VZM2 374 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 POTEHQ6S545 545 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 DSTYKQ6XUX3 929 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 ANO5Q75V66 913 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 C14orf80Q86SX3 495 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 SLC51BQ86UW2 128 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 ZNF410Q86VK4 478 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 ZNF654Q8IZM8 581 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 CCDC82Q8N4S0 544 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 LSMEM1Q8N8F7 131 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 ZFP28Q8NHY6 868 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 RAET1EQ8TD07 263 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 MCUR1Q96AQ8 359 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 MTMR8Q96EF0 704 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 CEP295NLQ96MC4 621 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 CEP63Q96MT8 703 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 NUDT12Q9BQG2 462 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 AIFM2Q9BRQ8 373 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 NT5C3AQ9H0P0 336 aa12.36□□□□□ -0.43
CCNA1-201ENST00000255465 NKIRAS1Q9NYS0 192 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms