RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 C17orf80Q9BSJ5 609 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 PDS5AQ29RF7 1337 aaKnown RBP13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 RHOBTB3O94955 611 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 SMAD1Q15797 465 aaKnown RBP13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 DGCR14Q96DF8 476 aaKnown RBP13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 CCSER1Q9C0I3 900 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 SARS2Q9NP81 518 aaKnown RBP13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 TM9SF1O15321 606 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 GLRA3O75311 464 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 PSAPP07602 524 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 GNL1P36915 607 aaPredicted RBP13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 CCNHP51946 323 aaPredicted RBP13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 PUDPQ08623 228 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 FAM47CQ5HY64 1035 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 SLC13A5Q86YT5 568 aaPredicted RBP13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 PPIL6Q8IXY8 311 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 ZNF34Q8IZ26 560 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 KYQ8NBH2 561 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 CPVLQ9H3G5 476 aa13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 RPF1Q9H9Y2 349 aaKnown RBP13.66□□□□□ -0.22
PCDHGA3-201ENST00000253812 GSG1L2A8MUP6 293 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 NMT2O60551 498 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 KLHL41O60662 606 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 RAG1P15918 1043 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 LRPAP1P30533 357 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 KRT20P35900 424 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 PLIN5Q00G26 463 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 EPS8Q12929 822 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 DALRD3Q5D0E6 543 aaKnown RBP13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 SLC27A3Q5K4L6 730 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 ELOA2Q8IYF1 753 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 BEST2Q8NFU1 509 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 BORCS5Q969J3 196 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 TMEM237Q96Q45 408 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 VTA1Q9NP79 307 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 ZNF180Q9UJW8 692 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 SERPINB5P36952 375 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 MXD4Q14582 209 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 AARS2Q5JTZ9 985 aaKnown RBP13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 METTL23Q86XA0 190 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 TATDN2Q93075 761 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 ZNF446Q9NWS9 450 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 SLC24A2Q9UI40 661 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 FAM196BA6NMK8 535 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 SLCO1B7G3V0H7 640 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 FCHO1O14526 889 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 CAMTA2O94983 1202 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 C1DQ13901 141 aaKnown RBP13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 CIAPIN1Q6FI81 312 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 SLC25A41Q8N5S1 370 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 ACTRT1Q8TDG2 376 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 SKA1Q96BD8 255 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 PLA2G12BQ9BX93 195 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 WHRNQ9P202 907 aa13.65□□□□□ -0.22
PCDHGA3-201ENST00000253812 PNMA6FA0A0J9YX94 578 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 UBA6A0AVT1 1052 aaPredicted RBP13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 KIF28PB7ZC32 967 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 ATP5BP06576 529 aaKnown RBP13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 NCKAP1LP55160 1127 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 GPSM2P81274 684 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 AP3B2Q13367 1082 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 ITPK1Q13572 414 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 TUBA3CQ13748 450 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 KCNT1Q5JUK3 1230 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 TBCELQ5QJ74 424 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 MROH9Q5TGP6 573 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 C12orf60Q5U649 245 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 C11orf88Q6PI97 169 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 FAM43BQ6ZT52 329 aaPredicted RBP13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 MB21D2Q8IYB1 491 aaPredicted RBP13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 SYTL1Q8IYJ3 562 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 RTKN2Q8IZC4 609 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 OR6Y1Q8NGX8 325 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 FAM45AQ8TCE6 357 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 MAGEC3Q8TD91 643 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 OSBPL10Q9BXB5 764 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 DHX35Q9H5Z1 703 aaKnown RBP13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 TDRD3Q9H7E2 651 aaKnown RBP13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 EPB41L4AQ9HCS5 686 aaPredicted RBP13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 TIMMDC1Q9NPL8 285 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 APEX2Q9UBZ4 518 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 IQGAP1P46940 1657 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 SLC16A3O15427 465 aaKnown RBP13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 H2AFYO75367 372 aaKnown RBP13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 VAV1P15498 845 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 CRKP46108 304 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 CASP5P51878 434 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 ERVK-24P63145 666 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 LRRC74AQ0VAA2 488 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 PRMT9Q6P2P2 845 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 FOXP4Q8IVH2 680 aaPredicted RBP13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 DENND6AQ8IWF6 608 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 DHRSXQ8N5I4 330 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 RNFT2Q96EX2 444 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 CDC42EP4Q9H3Q1 356 aaKnown RBP13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 FRMPD1Q5SYB0 1578 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 EMSYQ7Z589 1322 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 KIAA1210Q9ULL0 1709 aa13.64□□□□□ -0.23
PCDHGA3-201ENST00000253812 LGALS3BPQ08380 585 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms