RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 EXD1Q8NHP7 514 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 AENQ8WTP8 325 aaKnown RBP18.19■□□□□ 0.5
PCCB-201ENST00000251654 EPB41L5Q9HCM4 733 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 INPP5FQ9Y2H2 1132 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 TET1Q8NFU7 2136 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 TANC1Q9C0D5 1861 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 TTI1O43156 1089 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 PHF2O75151 1096 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 EOMESO95936 686 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 RARAP10276 462 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 ACAT1P24752 427 aaKnown RBP18.19■□□□□ 0.5
PCCB-201ENST00000251654 PSMA2P25787 234 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 ADORA2BP29275 332 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 RPL34P49207 117 aaKnown RBP18.19■□□□□ 0.5
PCCB-201ENST00000251654 FAM189BP81408 668 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 TUSC3Q13454 348 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 MAP9Q49MG5 647 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 TIGD5Q53EQ6 642 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 KIAA0319Q5VV43 1072 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 TXNRD3NBQ6F5E7 133 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 TRNP1Q6NT89 227 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 IFT20Q8IY31 132 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 FUKQ8N0W3 1084 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 TMEM86AQ8N2M4 240 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 DNAI2Q9GZS0 605 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.19■□□□□ 0.5
PCCB-201ENST00000251654 FAM53CQ9NYF3 392 aa18.19■□□□□ 0.5
PCCB-201ENST00000251654 MAP2K7O14733 419 aa18.18■□□□□ 0.5
PCCB-201ENST00000251654 PAPSS1O43252 624 aaPredicted RBP18.18■□□□□ 0.5
PCCB-201ENST00000251654 NBNO60934 754 aa18.18■□□□□ 0.5
PCCB-201ENST00000251654 CCL5P13501 91 aa18.18■□□□□ 0.5
PCCB-201ENST00000251654 GJC1P36383 396 aa18.18■□□□□ 0.5
PCCB-201ENST00000251654 SSR1P43307 286 aaKnown RBP18.18■□□□□ 0.5
PCCB-201ENST00000251654 SLC25A11Q02978 314 aaKnown RBP18.18■□□□□ 0.5
PCCB-201ENST00000251654 KLF1Q13351 362 aaPredicted RBP18.18■□□□□ 0.5
PCCB-201ENST00000251654 LLGL1Q15334 1064 aa18.18■□□□□ 0.5
PCCB-201ENST00000251654 TRADDQ15628 312 aa18.18■□□□□ 0.5
PCCB-201ENST00000251654 ATP13A4Q4VNC1 1196 aa18.18■□□□□ 0.5
PCCB-201ENST00000251654 TTC27Q6P3X3 843 aa18.18■□□□□ 0.5
PCCB-201ENST00000251654 CD300LGQ6UXG3 332 aa18.18■□□□□ 0.5
PCCB-201ENST00000251654 MAATS1Q7Z4T9 603 aa18.18■□□□□ 0.5
PCCB-201ENST00000251654 POLNQ7Z5Q5 900 aa18.18■□□□□ 0.5
PCCB-201ENST00000251654 ANKS1BQ7Z6G8 1248 aa18.18■□□□□ 0.5
PCCB-201ENST00000251654 HNRNPABQ99729 332 aaKnown RBP18.18■□□□□ 0.5
PCCB-201ENST00000251654 DDX43Q9NXZ2 648 aaKnown RBP18.18■□□□□ 0.5
PCCB-201ENST00000251654 C2CD4BA6NLJ0 364 aa18.17■□□□□ 0.5
PCCB-201ENST00000251654 PTPN1P18031 435 aaKnown RBP18.17■□□□□ 0.5
PCCB-201ENST00000251654 CHRNA3P32297 505 aa18.17■□□□□ 0.5
PCCB-201ENST00000251654 CARSP49589 748 aaKnown RBP18.17■□□□□ 0.5
PCCB-201ENST00000251654 BFSP2Q13515 415 aa18.17■□□□□ 0.5
PCCB-201ENST00000251654 CLLU1OSQ5K130 101 aa18.17■□□□□ 0.5
PCCB-201ENST00000251654 OR6B2Q6IFH4 312 aa18.17■□□□□ 0.5
PCCB-201ENST00000251654 C12orf50Q8NA57 414 aaPredicted RBP18.17■□□□□ 0.5
PCCB-201ENST00000251654 CCDC26Q8TAB7 109 aa18.17■□□□□ 0.5
PCCB-201ENST00000251654 CASKIN2Q8WXE0 1202 aa18.17■□□□□ 0.5
PCCB-201ENST00000251654 SEC14L1Q92503 715 aa18.17■□□□□ 0.5
PCCB-201ENST00000251654 FTHL17Q9BXU8 183 aa18.17■□□□□ 0.5
PCCB-201ENST00000251654 RNF208Q9H0X6 261 aa18.17■□□□□ 0.5
PCCB-201ENST00000251654 KLHL11Q9NVR0 708 aa18.17■□□□□ 0.5
PCCB-201ENST00000251654 MTUS1Q9ULD2 1270 aa18.17■□□□□ 0.5
PCCB-201ENST00000251654 TIMM13Q9Y5L4 95 aaPredicted RBP18.17■□□□□ 0.5
PCCB-201ENST00000251654 PITPNM1O00562 1244 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 B4GALT3O60512 393 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 B3GAT3O94766 335 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 RALAP11233 206 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 FLT3P36888 993 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 PLA2G4AP47712 749 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 LHX1P48742 406 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 ZNF143P52747 638 aaPredicted RBP18.16■□□□□ 0.5
PCCB-201ENST00000251654 KCTD19Q17RG1 926 aaPredicted RBP18.16■□□□□ 0.5
PCCB-201ENST00000251654 PAN2Q504Q3 1202 aaKnown RBP18.16■□□□□ 0.5
PCCB-201ENST00000251654 GLB1LQ6UWU2 654 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 DSTYKQ6XUX3 929 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 PAQR9Q6ZVX9 377 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 CCDC50Q8IVM0 306 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 SCUBE3Q8IX30 993 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 KHSRPQ92945 711 aaKnown RBP eCLIP18.16■□□□□ 0.53e-9■■■□□ 16.1
PCCB-201ENST00000251654 UROC1Q96N76 676 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 B3GNT5Q9BYG0 378 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 CRTAC1Q9NQ79 661 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 CYLDQ9NQC7 956 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 PCYOX1Q9UHG3 505 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 I3L4J1 428 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 IL1R2P27930 398 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 DR1Q01658 176 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 DHX34Q14147 1143 aaKnown RBP18.16■□□□□ 0.5
PCCB-201ENST00000251654 CASP8Q14790 479 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 ACAP1Q15027 740 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 TAF5Q15542 800 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 PLEKHG4Q58EX7 1191 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 ZDHHC17Q8IUH5 632 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 MAGOHBQ96A72 148 aaKnown RBP18.16■□□□□ 0.5
PCCB-201ENST00000251654 OSBPL8Q9BZF1 889 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 WBP1LQ9NX94 342 aa18.16■□□□□ 0.5
PCCB-201ENST00000251654 SCN5AQ14524 2016 aa18.15■□□□□ 0.5
PCCB-201ENST00000251654 CAPN15O75808 1086 aa18.15■□□□□ 0.5
PCCB-201ENST00000251654 ITGB1P05556 798 aa18.15■□□□□ 0.5
PCCB-201ENST00000251654 ECHS1P30084 290 aa18.15■□□□□ 0.5
PCCB-201ENST00000251654 EPHB4P54760 987 aa18.15■□□□□ 0.5
PCCB-201ENST00000251654 SLC6A3Q01959 620 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms