RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ANKRD22Q5VYY1 191 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 TAPT1Q6NXT6 567 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 MAMDC4Q6UXC1 1216 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 ARHGEF18Q6ZSZ5 1173 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 TRABD2AQ86V40 505 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 IFNLR1Q8IU57 520 aaPredicted RBP20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 UBA3Q8TBC4 463 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 VRTNQ9H8Y1 702 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 VPS37BQ9H9H4 285 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.51■□□□□ 0.872e-8■■■■□ 23.5
CDC42EP1-201ENST00000249014 CITO14578 2027 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 ASB14A6NK59 587 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 ZNF286BP0CG31 522 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 CYP2C8P10632 490 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 ATICP31939 592 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 TNFAIP2Q03169 654 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 CENPUQ71F23 418 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 FASTKD5Q7L8L6 764 aaKnown RBP20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 DPH6Q7L8W6 267 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 TDRPQ86YL5 185 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 HPDLQ96IR7 371 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 TGS1Q96RS0 853 aaKnown RBP20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 ASB7Q9H672 318 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 SLC12A4Q9UP95 1085 aa20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 USP15Q9Y4E8 981 aaPredicted RBP20.51■□□□□ 0.87
CDC42EP1-201ENST00000249014 TRIP11Q15643 1979 aa20.5■□□□□ 0.87
CDC42EP1-201ENST00000249014 GJA5P36382 358 aa20.5■□□□□ 0.87
CDC42EP1-201ENST00000249014 ZKSCAN8Q15776 578 aaPredicted RBP20.5■□□□□ 0.87
CDC42EP1-201ENST00000249014 SH3PXD2AQ5TCZ1 1133 aa20.5■□□□□ 0.87
CDC42EP1-201ENST00000249014 ANKMY2Q8IV38 441 aa20.5■□□□□ 0.87
CDC42EP1-201ENST00000249014 FUKQ8N0W3 1084 aa20.5■□□□□ 0.87
CDC42EP1-201ENST00000249014 KCTD6Q8NC69 237 aa20.5■□□□□ 0.87
CDC42EP1-201ENST00000249014 CMASQ8NFW8 434 aaPredicted RBP20.5■□□□□ 0.87
CDC42EP1-201ENST00000249014 CPT1BQ92523 772 aa20.5■□□□□ 0.87
CDC42EP1-201ENST00000249014 HSPH1Q92598 858 aa20.5■□□□□ 0.87
CDC42EP1-201ENST00000249014 HEXIM2Q96MH2 286 aaKnown RBP20.5■□□□□ 0.87
CDC42EP1-201ENST00000249014 KIF9Q9HAQ2 790 aa20.5■□□□□ 0.87
CDC42EP1-201ENST00000249014 KLC4Q9NSK0 619 aa20.5■□□□□ 0.87
CDC42EP1-201ENST00000249014 NKIRAS1Q9NYS0 192 aa20.5■□□□□ 0.87
CDC42EP1-201ENST00000249014 RNF181Q9P0P0 153 aa20.5■□□□□ 0.87
CDC42EP1-201ENST00000249014 GGT7Q9UJ14 662 aa20.5■□□□□ 0.87
CDC42EP1-201ENST00000249014 AGAP1Q9UPQ3 857 aa20.5■□□□□ 0.87
CDC42EP1-201ENST00000249014 PIK3R2O00459 728 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 SPAG7O75391 227 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 DNAJC8O75937 253 aaPredicted RBP20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 CYP3A5P20815 502 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 WDR4P57081 412 aaKnown RBP20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 GPX6P59796 221 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 PKN2Q16513 984 aaKnown RBP20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 HIF1AQ16665 826 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 RAB6CQ53S08 254 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 TRNP1Q6NT89 227 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 UNC45BQ8IWX7 931 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 TAB3Q8N5C8 712 aaPredicted RBP20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 TTC13Q8NBP0 860 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 MAGEB18Q96M61 343 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 PEBP4Q96S96 227 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 RAB6CQ9H0N0 254 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 CYP3A43Q9HB55 503 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 USP18Q9UMW8 372 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 PCNTO95613 3336 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 FAM47DPA6NHR8 397 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 TRUB2O95900 331 aaKnown RBP20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 VDRP11473 427 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 FOXN2P32314 431 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 RPL22P35268 128 aaKnown RBP20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 XRCC4Q13426 336 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 LAMC2Q13753 1193 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 TMEM132DQ14C87 1099 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 MSS51Q4VC12 460 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 FNBP1LQ5T0N5 605 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 FAM102AQ5T9C2 384 aaPredicted RBP20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 CGB2Q6NT52 195 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 NAT8LQ8N9F0 302 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 AFG1LQ8WV93 481 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 PIWIL1Q96J94 861 aaKnown RBP20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 CLUHO75153 1309 aa20.49■□□□□ 0.87
CDC42EP1-201ENST00000249014 LOC102724159A0A0B4J2E5 919 aa20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 MAGEB2O15479 319 aa20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 HMGCRP04035 888 aa20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 NDST1P52848 882 aa20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 PWP2Q15269 919 aaKnown RBP20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 FAM133BQ5BKY9 247 aaKnown RBP20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 PPP1R21Q6ZMI0 780 aa20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 RFX6Q8HWS3 928 aa20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 PPIL6Q8IXY8 311 aa20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 MRRFQ96E11 262 aaKnown RBP20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 ADPGKQ9BRR6 497 aa20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 WDR83Q9BRX9 315 aaKnown RBP20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 ADAM33Q9BZ11 813 aa20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 FRMD8P1Q9BZ68 369 aaPredicted RBP20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 TCRBV7S3A2A0A539 114 aa20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 RNF8O76064 485 aa20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 TAC1P20366 129 aa20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 NRLP54845 237 aa20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 ICE2Q659A1 982 aa20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 CYP4V2Q6ZWL3 525 aaPredicted RBP20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 PCGF5Q86SE9 256 aa20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 SHCBP1Q8NEM2 672 aa20.48■□□□□ 0.87
CDC42EP1-201ENST00000249014 RSAD2Q8WXG1 361 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms