RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 PEX6Q13608 980 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 PPP6R3Q5H9R7 873 aaPredicted RBP17.66■□□□□ 0.42
SGPP1-201ENST00000247225 RNASEH2BQ5TBB1 312 aaKnown RBP17.66■□□□□ 0.42
SGPP1-201ENST00000247225 SH3PXD2AQ5TCZ1 1133 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 C1orf146Q5VVC0 180 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 MCF2L2Q86YR7 1114 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 C4orf19Q8IY42 314 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 NLGN1Q8N2Q7 840 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 UBA3Q8TBC4 463 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 FBXO41Q8TF61 875 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 CLEC4DQ8WXI8 215 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 MMP19Q99542 508 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 TRIM4Q9C037 500 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 VCXQ9H320 206 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 AVENQ9NQS1 362 aaPredicted RBP17.66■□□□□ 0.42
SGPP1-201ENST00000247225 E5RJQ4 531 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 I3L4J1 428 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 ALOX15BO15296 676 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 MAP3K7O43318 606 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 OPHN1O60890 802 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 SKIP12755 728 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 ZACNQ401N2 412 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 NRG4Q8WWG1 115 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 ATXN7L3BQ96GX2 97 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 GJD4Q96KN9 370 aaPredicted RBP17.66■□□□□ 0.42
SGPP1-201ENST00000247225 APOL6Q9BWW8 343 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 XPNPEP1Q9NQW7 623 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 RNF19AQ9NV58 838 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 ATP8B3O60423 1300 aa17.66■□□□□ 0.42
SGPP1-201ENST00000247225 ENTPD3O75355 529 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 GMPRP36959 345 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 VHLP40337 213 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 C16orf46Q6P387 395 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 PRPF39Q86UA1 669 aaKnown RBP17.65■□□□□ 0.42
SGPP1-201ENST00000247225 PHC3Q8NDX5 983 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 TMC2Q8TDI7 906 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 SLCO2A1Q92959 643 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 KANSL3Q9P2N6 904 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 POLIQ9UNA4 740 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 COQ4Q9Y3A0 265 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 CCDC160A6NGH7 325 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 EXTL3O43909 919 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 IL1R2P27930 398 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 CACNA2D1P54289 1103 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 ZNF252P-AS1Q0IIN9 211 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 MORF4L2Q15014 288 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 CHI3L2Q15782 390 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 LRRC74BQ6ZQY2 392 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 TAS1R3Q7RTX0 852 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 TMEM35BQ8NCS4 154 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 TFAP2BQ92481 460 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 ATP6V0A1Q93050 837 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 HERC5Q9UII4 1024 aaKnown RBP17.65■□□□□ 0.42
SGPP1-201ENST00000247225 ADAMTSL1Q8N6G6 1762 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 hCG_1818297A0A087WSY0 165 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 ACVR2BQ13705 512 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 PPP2R5DQ14738 602 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 PARP6Q2NL67 630 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 CDHR3Q6ZTQ4 885 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 LRRC71Q8N4P6 559 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 CYP26B1Q9NR63 512 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 CISHQ9NSE2 258 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 UBIAD1Q9Y5Z9 338 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 ZNF536O15090 1300 aa17.65■□□□□ 0.42
SGPP1-201ENST00000247225 A0A1B0GVG6 124 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 SPDYE2BA6NHP3 402 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 TYROBPO43914 113 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 ZMPSTE24O75844 475 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 CYP1A1P04798 512 aaPredicted RBP17.64■□□□□ 0.41
SGPP1-201ENST00000247225 GJB1P08034 283 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 SPDYE6P0CI01 402 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 AQP5P55064 265 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 CDH6P55285 790 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 UBAP2LQ14157 1087 aaKnown RBP17.64■□□□□ 0.41
SGPP1-201ENST00000247225 SLC45A4Q5BKX6 768 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 SNRNP48Q6IEG0 339 aaKnown RBP17.64■□□□□ 0.41
SGPP1-201ENST00000247225 DENND1BQ6P3S1 775 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 B3GNT9Q6UX72 402 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 TEX9Q8N6V9 391 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 HAPLN2Q9GZV7 340 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 RPAP3Q9H6T3 665 aaPredicted RBP17.64■□□□□ 0.41
SGPP1-201ENST00000247225 SP100P23497 879 aaPredicted RBP17.64■□□□□ 0.41
SGPP1-201ENST00000247225 RGS7P49802 495 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 PAPOLAP51003 745 aaKnown RBP17.64■□□□□ 0.41
SGPP1-201ENST00000247225 KRT76Q01546 638 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 GRIK3Q13003 919 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 C12orf56Q8IXR9 622 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 CEP120Q8N960 986 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 SMC1BQ8NDV3 1235 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 PYDC1Q8WXC3 89 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 NGRNQ9NPE2 291 aaKnown RBP17.64■□□□□ 0.41
SGPP1-201ENST00000247225 IL1RAPL1Q9NZN1 696 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 TMEM191CA6NGB0 347 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 MCF2LO15068 1137 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 PDE5AO76074 875 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 PSMG1O95456 288 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 C4BPAP04003 597 aaKnown RBP17.64■□□□□ 0.41
SGPP1-201ENST00000247225 TMEM191BP0C7N4 346 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 JAK3P52333 1124 aa17.64■□□□□ 0.41
SGPP1-201ENST00000247225 CRADDP78560 199 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms