RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 POLNQ7Z5Q5 900 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 WDR49Q8IV35 697 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 BRI3BPQ8WY22 251 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 CPT1BQ92523 772 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 SLC7A6OSQ96CW6 309 aaPredicted RBP16.31■□□□□ 0.2
CTSD-201ENST00000236671 DHRS4Q9BTZ2 278 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 SAE1Q9UBE0 346 aaPredicted RBP16.31■□□□□ 0.2
CTSD-201ENST00000236671 TTLL13PA6NNM8 815 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 ECM2O94769 699 aaPredicted RBP16.3■□□□□ 0.2
CTSD-201ENST00000236671 ATG7O95352 703 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 CTCFP49711 727 aaPredicted RBP16.3■□□□□ 0.2
CTSD-201ENST00000236671 MYL6P60660 151 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 SLC25A11Q02978 314 aaKnown RBP16.3■□□□□ 0.2
CTSD-201ENST00000236671 PPIL2Q13356 520 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 CAPSQ13938 189 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 TFDP1Q14186 410 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 TMEM132BQ14DG7 1078 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 MSS51Q4VC12 460 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 FNBP1LQ5T0N5 605 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 GADL1Q6ZQY3 521 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 PCGF5Q86SE9 256 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 NAT8LQ8N9F0 302 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 MZB1Q8WU39 189 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 SLC7A3Q8WY07 619 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 TFAP2BQ92481 460 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 ZNF75CPQ92670 426 aaPredicted RBP16.3■□□□□ 0.2
CTSD-201ENST00000236671 ZNF518BQ9C0D4 1074 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 MTMR12Q9C0I1 747 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 NIF3L1Q9GZT8 377 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 TMEM134Q9H6X4 195 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 CISHQ9NSE2 258 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 ZMYND8Q9ULU4 1186 aaPredicted RBP16.3■□□□□ 0.2
CTSD-201ENST00000236671 ADAMTS5Q9UNA0 930 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 ZWINTO95229 277 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 SSTR1P30872 391 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 AP3M2P53677 418 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 OTUD4Q01804 1114 aaKnown RBP16.3■□□□□ 0.2
CTSD-201ENST00000236671 ZNF394Q53GI3 561 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 ZC3H12AQ5D1E8 599 aaKnown RBP16.3■□□□□ 0.2
CTSD-201ENST00000236671 SPDYAQ5MJ70 313 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 PPIL6Q8IXY8 311 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 ATP11CQ8NB49 1132 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 ACTL9Q8TC94 416 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 NIFKQ9BYG3 293 aaKnown RBP16.3■□□□□ 0.2
CTSD-201ENST00000236671 C10orf88Q9H8K7 445 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 PCDHGC3Q9UN70 934 aa16.3■□□□□ 0.2
CTSD-201ENST00000236671 LOC285556D6RIA3 1793 aa16.29■□□□□ 0.2
CTSD-201ENST00000236671 CCL15-CCL14A0A0B4J2E2 113 aa16.29■□□□□ 0.2
CTSD-201ENST00000236671 EIF4BP23588 611 aaKnown RBP16.29■□□□□ 0.2
CTSD-201ENST00000236671 ADRA1DP25100 572 aa16.29■□□□□ 0.2
CTSD-201ENST00000236671 DYNLT1P63172 113 aa16.29■□□□□ 0.2
CTSD-201ENST00000236671 MAPK6Q16659 721 aa16.29■□□□□ 0.2
CTSD-201ENST00000236671 CCL15Q16663 113 aa16.29■□□□□ 0.2
CTSD-201ENST00000236671 ANKRD20A2Q5SQ80 823 aa16.29■□□□□ 0.2
CTSD-201ENST00000236671 ANKRD20A1Q5TYW2 823 aa16.29■□□□□ 0.2
CTSD-201ENST00000236671 ANKRD20A3Q5VUR7 823 aa16.29■□□□□ 0.2
CTSD-201ENST00000236671 ADGRD1Q6QNK2 874 aa16.29■□□□□ 0.2
CTSD-201ENST00000236671 BZW1Q7L1Q6 419 aaKnown RBP16.29■□□□□ 0.2
CTSD-201ENST00000236671 DHX37Q8IY37 1157 aaKnown RBP16.29■□□□□ 0.2
CTSD-201ENST00000236671 ZNF276Q8N554 614 aa16.29■□□□□ 0.2
CTSD-201ENST00000236671 ARFGAP1Q8N6T3 406 aa16.29■□□□□ 0.2
CTSD-201ENST00000236671 PAFAH2Q99487 392 aa16.29■□□□□ 0.2
CTSD-201ENST00000236671 ACSS3Q9H6R3 686 aa16.29■□□□□ 0.2
CTSD-201ENST00000236671 BATF3Q9NR55 127 aa16.29■□□□□ 0.2
CTSD-201ENST00000236671 NKX1-2Q9UD57 310 aaPredicted RBP16.29■□□□□ 0.2
CTSD-201ENST00000236671 EFR3BQ9Y2G0 817 aa16.29■□□□□ 0.2
CTSD-201ENST00000236671 LCTP09848 1927 aa16.29■□□□□ 0.2
CTSD-201ENST00000236671 E7ESA3 106 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 C2CD2LO14523 706 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 ADCY3O60266 1144 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 PEX11AO75192 247 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 IL1R2P27930 398 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 PHBP35232 272 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 RFC1P35251 1148 aaPredicted RBP16.28■□□□□ 0.2
CTSD-201ENST00000236671 ARL4CP56559 192 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 SLC45A4Q5BKX6 768 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 ZNF449Q6P9G9 518 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 DNAJC5GQ8N7S2 189 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 FAM13CQ8NE31 585 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 PYROXD1Q8WU10 500 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 ACAD9Q9H845 621 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 AGTPBP1Q9UPW5 1226 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 A0A0G2JLL6 359 aaPredicted RBP16.28■□□□□ 0.2
CTSD-201ENST00000236671 TRAFD1O14545 582 aaPredicted RBP16.28■□□□□ 0.2
CTSD-201ENST00000236671 LRCH4O75427 683 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 PIAS1O75925 651 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 CBX6O95503 412 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 PSMA2P25787 234 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 TAZQ16635 292 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 SMTNL2Q2TAL5 461 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 PTPN20Q4JDL3 420 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 ZPBP2Q6X784 338 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 BBS12Q6ZW61 710 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 NLRP9Q7RTR0 991 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 PRRT2Q7Z6L0 340 aaPredicted RBP16.28■□□□□ 0.2
CTSD-201ENST00000236671 TBC1D10AQ9BXI6 508 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 TEX13BQ9BXU2 312 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 FRMD8P1Q9BZ68 369 aaPredicted RBP16.28■□□□□ 0.2
CTSD-201ENST00000236671 RNPEPL1Q9HAU8 725 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 NPHS2Q9NP85 383 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms