RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 PCDHA6Q9UN73 950 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 PCDHA8Q9Y5H6 950 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 GSTTP1A0A1W2PQM5 241 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 TM9SF1O15321 606 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 GUCY1B2O75343 617 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 TRPA1O75762 1119 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 C8BP07358 591 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 PPP1R2P3Q6NXS1 205 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 RAVER1Q8IY67 606 aaKnown RBP13.59□□□□□ -0.23
MSH2-201ENST00000233146 THEMISQ8N1K5 641 aaPredicted RBP13.59□□□□□ -0.23
MSH2-201ENST00000233146 TCP10LQ8TDR4 215 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 MORC4Q8TE76 937 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 TAMM41Q96BW9 452 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 THAP11Q96EK4 314 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 NLRP4Q96MN2 994 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 WNT8AQ9H1J5 351 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 GNEQ9Y223 722 aaKnown RBP13.59□□□□□ -0.23
MSH2-201ENST00000233146 B3GNT3Q9Y2A9 372 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 SF3B1O75533 1304 aaKnown RBP eCLIP13.59□□□□□ -0.234e-7■■■■■ 49.6
MSH2-201ENST00000233146 UNCXA6NJT0 531 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 PSMD12O00232 456 aaPredicted RBP13.59□□□□□ -0.23
MSH2-201ENST00000233146 EPHA7Q15375 998 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 TRIP13Q15645 432 aaPredicted RBP13.59□□□□□ -0.23
MSH2-201ENST00000233146 PQLC1Q8N2U9 271 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 ELMOD1Q8N336 334 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 LARGE2Q8N3Y3 721 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 RPGRQ92834 1020 aaKnown RBP13.59□□□□□ -0.23
MSH2-201ENST00000233146 C12orf43Q96C57 262 aaKnown RBP13.59□□□□□ -0.23
MSH2-201ENST00000233146 PNMA5Q96PV4 448 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 NUDT12Q9BQG2 462 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 DCUN1D5Q9BTE7 237 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 TDRD1Q9BXT4 1180 aaKnown RBP13.59□□□□□ -0.23
MSH2-201ENST00000233146 HIPK3Q9H422 1215 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 SMYD3Q9H7B4 428 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 CRNNQ9UBG3 495 aaPredicted RBP13.59□□□□□ -0.23
MSH2-201ENST00000233146 ZNF536O15090 1300 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 SORBS2O94875 1100 aaKnown RBP13.58□□□□□ -0.24
MSH2-201ENST00000233146 PLS3P13797 630 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 COMTP21964 271 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 RRM1P23921 792 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 ADCY8P40145 1251 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 TECP42680 631 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 CTBSQ01459 385 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 PDK1Q15118 436 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 TCEAL1Q15170 157 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 MOGQ16653 247 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 C6orf52Q5T4I8 152 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 ZNF790Q6PG37 636 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 CALML6Q8TD86 181 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 SH3GLB2Q9NR46 395 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 ERVV-2B6SEH9 535 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 DLATP10515 647 aaKnown RBP13.58□□□□□ -0.24
MSH2-201ENST00000233146 CCDC130P13994 396 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 STAT1P42224 750 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 SLC25A3Q00325 362 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 IFITM2Q01629 132 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 SF3B3Q15393 1217 aaKnown RBP13.58□□□□□ -0.24
MSH2-201ENST00000233146 Q3C1V9 767 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 SGO2Q562F6 1265 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 XKR5Q6UX68 686 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 CHSY1Q86X52 802 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 GSDMBQ8TAX9 411 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 ZNF512Q96ME7 567 aaPredicted RBP13.58□□□□□ -0.24
MSH2-201ENST00000233146 ALG13Q9NP73 1137 aaKnown RBP13.58□□□□□ -0.24
MSH2-201ENST00000233146 TAS2R14Q9NYV8 317 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 SLC17A7Q9P2U7 560 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 SEL1LQ9UBV2 794 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 PPP1R1BQ9UD71 204 aaPredicted RBP13.58□□□□□ -0.24
MSH2-201ENST00000233146 PSMD13Q9UNM6 376 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 TJP1Q07157 1748 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 RREB1Q92766 1687 aa13.58□□□□□ -0.24
MSH2-201ENST00000233146 TBKBP1A7MCY6 615 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 MEI4A8MW99 385 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 FSCN2O14926 492 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 CLASP2O75122 1294 aaKnown RBP13.57□□□□□ -0.24
MSH2-201ENST00000233146 KRT75O95678 551 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 BMXP51813 675 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 CDKL1Q00532 357 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 ZYXQ15942 572 aaKnown RBP13.57□□□□□ -0.24
MSH2-201ENST00000233146 TRIM71Q2Q1W2 868 aaKnown RBP13.57□□□□□ -0.24
MSH2-201ENST00000233146 GJB7Q6PEY0 223 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 CPNE9Q8IYJ1 553 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 CADM3Q8N126 398 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 HPS1Q92902 700 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 INO80BQ9C086 356 aaPredicted RBP13.57□□□□□ -0.24
MSH2-201ENST00000233146 C12orf65Q9H3J6 166 aaKnown RBP13.57□□□□□ -0.24
MSH2-201ENST00000233146 SLC24A2Q9UI40 661 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 POMPQ9Y244 141 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 A0A1B0GUL6 1792 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 P4HA1P13674 534 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 SCNN1DP51172 638 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 COASYQ13057 564 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 TTC30AQ86WT1 665 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 TMEM126BQ8IUX1 230 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 PDZD8Q8NEN9 1154 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 ZNF641Q96N77 438 aaPredicted RBP13.57□□□□□ -0.24
MSH2-201ENST00000233146 KCTD10Q9H3F6 313 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 PRR5-ARHGAP8B1AHC4 643 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 E5RJQ4 531 aa13.57□□□□□ -0.24
MSH2-201ENST00000233146 DHRS4L1P0CG22 281 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms