RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 M0QZ92 97 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 RARBP10826 455 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 PHKA2P46019 1235 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 MTFR1Q15390 333 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 LRRC8EQ6NSJ5 796 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 POLNQ7Z5Q5 900 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 ACOT1Q86TX2 421 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 FAM131BQ86XD5 332 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 STK32AQ8WU08 396 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 UPF3AQ9H1J1 476 aaKnown RBP14.32□□□□□ -0.12
NFKB1-201ENST00000226574 SLC12A6Q9UHW9 1150 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 RPS6KL1Q9Y6S9 549 aa14.32□□□□□ -0.12
NFKB1-201ENST00000226574 NUDT2P50583 147 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 TWF2Q6IBS0 349 aaKnown RBP14.31□□□□□ -0.12
NFKB1-201ENST00000226574 RTKN2Q8IZC4 609 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 TRAPPC12Q8WVT3 735 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 DCPSQ96C86 337 aaKnown RBP14.31□□□□□ -0.12
NFKB1-201ENST00000226574 FAM163AQ96GL9 167 aaPredicted RBP14.31□□□□□ -0.12
NFKB1-201ENST00000226574 FOXP3Q9BZS1 431 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 AGO4Q9HCK5 861 aaKnown RBP14.31□□□□□ -0.12
NFKB1-201ENST00000226574 RHBDL2Q9NX52 303 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 PAK5Q9P286 719 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 CACNA1FO60840 1977 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 ZMPSTE24O75844 475 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 HNRNPCP07910 306 aaKnown RBP eCLIP14.31□□□□□ -0.12
NFKB1-201ENST00000226574 PMLP29590 882 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 TSTA3Q13630 321 aaPredicted RBP14.31□□□□□ -0.12
NFKB1-201ENST00000226574 ATF7IP2Q5U623 682 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 DSTYKQ6XUX3 929 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 HACE1Q8IYU2 909 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 SEPT1Q8WYJ6 367 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 HIC2Q96JB3 615 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 CNBD2Q96M20 576 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 RNPEPL1Q9HAU8 725 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 PIK3C2AO00443 1686 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 GOLGA8TH3BQL2 631 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 HUS1O60921 280 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 AVILO75366 819 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 NPTXRO95502 500 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 PTDSS1P48651 473 aaKnown RBP14.31□□□□□ -0.12
NFKB1-201ENST00000226574 DDR1Q08345 913 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 USP10Q14694 798 aaKnown RBP14.31□□□□□ -0.12
NFKB1-201ENST00000226574 EFTUD2Q15029 972 aaKnown RBP eCLIP14.31□□□□□ -0.123e-6■■■■□ 23.5
NFKB1-201ENST00000226574 PDCD2Q16342 344 aaPredicted RBP14.31□□□□□ -0.12
NFKB1-201ENST00000226574 RSBN1LQ6PCB5 846 aaPredicted RBP14.31□□□□□ -0.12
NFKB1-201ENST00000226574 NPNTQ6UXI9 565 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 CDKL3Q8IVW4 592 aaPredicted RBP14.31□□□□□ -0.12
NFKB1-201ENST00000226574 PPP1R13LQ8WUF5 828 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 PYDC1Q8WXC3 89 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 RXFP2Q8WXD0 754 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 FSD1LQ9BXM9 530 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 ZCWPW1Q9H0M4 648 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 USP18Q9UMW8 372 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 TAP1Q03518 808 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 SUPT20HL1Q3ZLR7 823 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 DNAL1Q4LDG9 190 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 TTC39BQ5VTQ0 682 aaPredicted RBP14.31□□□□□ -0.12
NFKB1-201ENST00000226574 ZNF677Q86XU0 584 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 FAM71AQ8IYT1 594 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 HPDLQ96IR7 371 aa14.31□□□□□ -0.12
NFKB1-201ENST00000226574 MYH8P13535 1937 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 BNIP3LO60238 219 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 USP12O75317 370 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 ARMCX2Q7L311 632 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 SCN4BQ8IWT1 228 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 MECRQ9BV79 373 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 DEFB129Q9H1M3 183 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 SARS2Q9NP81 518 aaKnown RBP14.3□□□□□ -0.12
NFKB1-201ENST00000226574 ARHGAP26Q9UNA1 814 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 LZTS1Q9Y250 596 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 GOLGA8CPA6NN73 597 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 GPD1P21695 349 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 AVPR1AP37288 418 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 EFNA5P52803 228 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 NSUN2Q08J23 767 aaKnown RBP eCLIP14.3□□□□□ -0.12
NFKB1-201ENST00000226574 BZW1Q7L1Q6 419 aaKnown RBP14.3□□□□□ -0.12
NFKB1-201ENST00000226574 CYP4X1Q8N118 509 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 CDC26Q8NHZ8 85 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 PDCD6IPQ8WUM4 868 aaKnown RBP14.3□□□□□ -0.12
NFKB1-201ENST00000226574 SHC3Q92529 594 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 ART4Q93070 314 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 SRPK1Q96SB4 655 aaKnown RBP14.3□□□□□ -0.12
NFKB1-201ENST00000226574 GRID1Q9ULK0 1009 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 POLIQ9UNA4 740 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 TTC36A6NLP5 189 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 DFFAO00273 331 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 CXCL8P10145 99 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 ABCD1P33897 745 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 COPAP53621 1224 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 XRCC4Q13426 336 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 RARS2Q5T160 578 aaKnown RBP14.3□□□□□ -0.12
NFKB1-201ENST00000226574 EFCAB12Q6NXP0 572 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 RNF168Q8IYW5 571 aaPredicted RBP14.3□□□□□ -0.12
NFKB1-201ENST00000226574 NUP93Q8N1F7 819 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 EIF1ADQ8N9N8 165 aaKnown RBP14.3□□□□□ -0.12
NFKB1-201ENST00000226574 PIK3R5Q8WYR1 880 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 VPS39Q96JC1 886 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 CCDC90BQ9GZT6 254 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 CAAP1Q9H8G2 361 aa14.3□□□□□ -0.12
NFKB1-201ENST00000226574 KLK14Q9P0G3 267 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms