RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 RTN2O75298 545 aa12.34□□□□□ -0.43
TNFAIP1-201ENST00000226225 HSPA6P17066 643 aa12.34□□□□□ -0.43
TNFAIP1-201ENST00000226225 TMC3Q7Z5M5 1100 aa12.34□□□□□ -0.43
TNFAIP1-201ENST00000226225 C1orf131Q8NDD1 294 aaKnown RBP12.34□□□□□ -0.43
TNFAIP1-201ENST00000226225 CCT6BQ92526 530 aa12.34□□□□□ -0.43
TNFAIP1-201ENST00000226225 NUP85Q9BW27 656 aa12.34□□□□□ -0.43
TNFAIP1-201ENST00000226225 PRG3Q9Y2Y8 225 aaPredicted RBP12.34□□□□□ -0.43
TNFAIP1-201ENST00000226225 NFS1Q9Y697 457 aa12.34□□□□□ -0.43
TNFAIP1-201ENST00000226225 FAM189A1O60320 539 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 CSPG5O95196 566 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 CFHP08603 1231 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 TNFRSF8P28908 595 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 ADORA2BP29275 332 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 AFF1P51825 1210 aaKnown RBP12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 NDST1P52848 882 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 FMO1Q01740 532 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 FBXO47Q5MNV8 452 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 WLSQ5T9L3 541 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 DPY19L2P1Q6NXN4 242 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 ERICH1Q86X53 443 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 SCLYQ96I15 445 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 HESX1Q9UBX0 185 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 ANAPC7Q9UJX3 599 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 AMFRQ9UKV5 643 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 ITGA11Q9UKX5 1188 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 C2CD2Q9Y426 696 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 PLXNA1Q9UIW2 1896 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 UBOX5O94941 541 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 CD4P01730 458 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 PRMT2P55345 433 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 DENND2CQ68D51 928 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 C15orf39Q6ZRI6 1047 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 CD302Q8IX05 232 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 C12orf29Q8N999 325 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 TMEM35BQ8NCS4 154 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 CCDC26Q8TAB7 109 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 MED10Q9BTT4 135 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 UPF3AQ9H1J1 476 aaKnown RBP12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 RNF14Q9UBS8 474 aa12.33□□□□□ -0.44
TNFAIP1-201ENST00000226225 GJB6O95452 261 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 CKBP12277 381 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 RGS7P49802 495 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 CUL1Q13616 776 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 SLC29A2Q14542 456 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 CYP4A22Q5TCH4 519 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 LHX8Q68G74 356 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 CCDC50Q8IVM0 306 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 MREGQ8N565 214 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 RFFLQ8WZ73 363 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 PDE4DIPQ5VU43 2346 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 ARVCFO00192 962 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 ACAT1P24752 427 aaKnown RBP12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 LBX1P52954 281 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 IFRD2Q12894 506 aaPredicted RBP12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 APPL2Q8NEU8 664 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 SNX27Q96L92 541 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 NT5C1AQ9BXI3 368 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 TBK1Q9UHD2 729 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 RRM1P23921 792 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 TAF6P49848 677 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 PTK7Q13308 1070 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 SPOUT1Q5T280 376 aaKnown RBP12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 MAP3K21Q5TCX8 1036 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 GLB1LQ6UWU2 654 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 ZNF564Q8TBZ8 553 aaPredicted RBP12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 KLHL29Q96CT2 875 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 ADAM33Q9BZ11 813 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 RSAD1Q9HA92 442 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 FGFR1OP2Q9NVK5 253 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 HMGXB4Q9UGU5 601 aa12.32□□□□□ -0.44
TNFAIP1-201ENST00000226225 KPNA7A9QM74 516 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 LCA5LO95447 670 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 CA8P35219 290 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 PSMC1P62191 440 aaKnown RBP12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 SARNPP82979 210 aaKnown RBP12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 SATB1Q01826 763 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 LPIN1Q14693 890 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 PCBP1Q15365 356 aaKnown RBP eCLIP12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 SGO2Q562F6 1265 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 RUBCNQ92622 972 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 ZNF560Q96MR9 790 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 TSPYL2Q9H2G4 693 aaPredicted RBP12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 PLEKHA5Q9HAU0 1116 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 PCDHGC5Q9Y5F6 944 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 PMM2O15305 246 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 GNL1P36915 607 aaPredicted RBP12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 VPS41P49754 854 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 CLDN10P78369 228 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 BFSP2Q13515 415 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 CRYMQ14894 314 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 SYCE1Q8N0S2 351 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 DBF4BQ8NFT6 615 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 FBXO25Q8TCJ0 367 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 MRRFQ96E11 262 aaKnown RBP12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 SEMA4AQ9H3S1 761 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 ECT2Q9H8V3 914 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 H0Y3Z8 333 aa12.31□□□□□ -0.44
TNFAIP1-201ENST00000226225 MED7O43513 233 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms