RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 SLFN11Q7Z7L1 901 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 DDX42Q86XP3 938 aaKnown RBP eCLIP19.2■□□□□ 0.66
CLIP2-201ENST00000223398 FAM136AQ96C01 138 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 SLC39A10Q9ULF5 831 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 PYGLP06737 847 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 MZF1P28698 734 aaPredicted RBP19.2■□□□□ 0.66
CLIP2-201ENST00000223398 PBLDP30039 288 aaPredicted RBP19.2■□□□□ 0.66
CLIP2-201ENST00000223398 OAZ1P54368 228 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 KAT2BQ92831 832 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 SYT15Q9BQS2 421 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 SPTLC1O15269 473 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 MAP3K13O43283 966 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 AKAP3O75969 853 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 EPB42P16452 691 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 LRRC74AQ0VAA2 488 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 TAF11Q15544 211 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 COG1Q8WTW3 980 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 SLC47A2Q86VL8 602 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 CERS5Q8N5B7 392 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 OR2W6PQ8NHA6 318 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 CALML6Q8TD86 181 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 SGF29Q96ES7 293 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 ERGIC2Q96RQ1 377 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 GTF3C4Q9UKN8 822 aa19.2■□□□□ 0.66
CLIP2-201ENST00000223398 HEATR9A2RTY3 570 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 GMNCA6NCL1 334 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 RAD51CO43502 376 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 TSPAN3O60637 253 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 RPLP2P05387 115 aaKnown RBP19.19■□□□□ 0.66
CLIP2-201ENST00000223398 RHOCP08134 193 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 CARSP49589 748 aaKnown RBP19.19■□□□□ 0.66
CLIP2-201ENST00000223398 RARRES1P49788 294 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 KYNUQ16719 465 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 EARS2Q5JPH6 523 aaKnown RBP19.19■□□□□ 0.66
CLIP2-201ENST00000223398 CLEC17AQ6ZS10 378 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 XAB2Q9HCS7 855 aaKnown RBP19.19■□□□□ 0.66
CLIP2-201ENST00000223398 KANSL3Q9P2N6 904 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 STMN1P16949 149 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 SLC27A1Q6PCB7 646 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 FAM161BQ96MY7 647 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 CAPN10Q9HC96 672 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 GGT7Q9UJ14 662 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 RNF103-CHMP3A0A140T963 221 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 SLITRK3O94933 977 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 SPRP35270 261 aaPredicted RBP19.19■□□□□ 0.66
CLIP2-201ENST00000223398 NTRK3Q16288 839 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 CACUL1Q86Y37 369 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 ENGASEQ8NFI3 743 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 RIN2Q8WYP3 895 aaPredicted RBP19.19■□□□□ 0.66
CLIP2-201ENST00000223398 SCUBE2Q9NQ36 999 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 FAF1Q9UNN5 650 aaPredicted RBP19.19■□□□□ 0.66
CLIP2-201ENST00000223398 RNASEH1O60930 286 aaKnown RBP19.19■□□□□ 0.66
CLIP2-201ENST00000223398 GUCY2CP25092 1073 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 TAF2Q6P1X5 1199 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 ATG4AQ8WYN0 398 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 ANKS1AQ92625 1134 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 PRMT1Q99873 361 aaKnown RBP19.19■□□□□ 0.66
CLIP2-201ENST00000223398 ATXN3LQ9H3M9 355 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 NMRK2Q9NPI5 230 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 SLIT1O75093 1534 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 A0A087X0T9 212 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 LGALS2P05162 132 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 FAM228BP0C875 321 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 KRT4P19013 534 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 SP3Q02447 781 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 PTPN11Q06124 597 aaPredicted RBP19.19■□□□□ 0.66
CLIP2-201ENST00000223398 SV2AQ7L0J3 742 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 TAGAPQ8N103 731 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 TATDN2Q93075 761 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 ADAM2Q99965 735 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 APOL2Q9BQE5 337 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 ACTR5Q9H9F9 607 aaPredicted RBP19.19■□□□□ 0.66
CLIP2-201ENST00000223398 KBTBD4Q9NVX7 518 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.19■□□□□ 0.66
CLIP2-201ENST00000223398 SUFUQ9UMX1 484 aa19.19■□□□□ 0.66
CLIP2-201ENST00000223398 SYNCRIPO60506 623 aaKnown RBP19.18■□□□□ 0.66
CLIP2-201ENST00000223398 TINF2Q9BSI4 451 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 KIAA1257Q9ULG3 409 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 MAP2P11137 1827 aaKnown RBP19.18■□□□□ 0.66
CLIP2-201ENST00000223398 MTSS1O43312 755 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 ANXA9O76027 345 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 RAB27AP51159 221 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 ELAVL2Q12926 359 aaKnown RBP19.18■□□□□ 0.66
CLIP2-201ENST00000223398 MROH9Q5TGP6 573 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 CATSPERGQ6ZRH7 1159 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 NUP93Q8N1F7 819 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 KCNF1Q9H3M0 494 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 VWDEQ8N2E2 1590 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 LUC7L3O95232 432 aaKnown RBP19.18■□□□□ 0.66
CLIP2-201ENST00000223398 HSPA9P38646 679 aaKnown RBP19.18■□□□□ 0.66
CLIP2-201ENST00000223398 MAGEA4P43358 317 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 CCL23P55773 120 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 RHOAP61586 193 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 RGMBQ6NW40 437 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 OTOP1Q7RTM1 612 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 DNAAF5Q86Y56 855 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 SLC20A1Q8WUM9 679 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 NR1H4Q96RI1 486 aaPredicted RBP19.18■□□□□ 0.66
CLIP2-201ENST00000223398 ADAM21Q9UKJ8 722 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 IPPQ9Y573 584 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms