RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 UNC93AQ86WB7 457 aa13.49□□□□□ -0.25
LSM5-201ENST00000223084 CRYBG2Q8N1P7 616 aa13.49□□□□□ -0.25
LSM5-201ENST00000223084 SLC44A3Q8N4M1 653 aa13.49□□□□□ -0.25
LSM5-201ENST00000223084 SLITRK6Q9H5Y7 841 aa13.49□□□□□ -0.25
LSM5-201ENST00000223084 GDE1Q9NZC3 331 aa13.49□□□□□ -0.25
LSM5-201ENST00000223084 DACH1Q9UI36 760 aa13.49□□□□□ -0.25
LSM5-201ENST00000223084 PIEZO1Q92508 2521 aa13.48□□□□□ -0.25
LSM5-201ENST00000223084 PMM2O15305 246 aa13.48□□□□□ -0.25
LSM5-201ENST00000223084 NOL4O94818 638 aa13.48□□□□□ -0.25
LSM5-201ENST00000223084 AFPP02771 609 aaKnown RBP13.48□□□□□ -0.25
LSM5-201ENST00000223084 MTIF2P46199 727 aaKnown RBP13.48□□□□□ -0.25
LSM5-201ENST00000223084 GPR158Q5T848 1215 aa13.48□□□□□ -0.25
LSM5-201ENST00000223084 TANGO2Q6ICL3 276 aa13.48□□□□□ -0.25
LSM5-201ENST00000223084 C11orf57Q6ZUT1 292 aaPredicted RBP13.48□□□□□ -0.25
LSM5-201ENST00000223084 MTSS1LQ765P7 747 aa13.48□□□□□ -0.25
LSM5-201ENST00000223084 TMEM150AQ86TG1 271 aa13.48□□□□□ -0.25
LSM5-201ENST00000223084 FUKQ8N0W3 1084 aa13.48□□□□□ -0.25
LSM5-201ENST00000223084 LMO3Q8TAP4 145 aa13.48□□□□□ -0.25
LSM5-201ENST00000223084 SLC2A14Q8TDB8 520 aa13.48□□□□□ -0.25
LSM5-201ENST00000223084 KAT5Q92993 513 aa13.48□□□□□ -0.25
LSM5-201ENST00000223084 NT5C1AQ9BXI3 368 aa13.48□□□□□ -0.25
LSM5-201ENST00000223084 PLA2G2FQ9BZM2 168 aa13.48□□□□□ -0.25
LSM5-201ENST00000223084 THAP9Q9H5L6 903 aa13.48□□□□□ -0.25
LSM5-201ENST00000223084 CISHQ9NSE2 258 aa13.48□□□□□ -0.25
LSM5-201ENST00000223084 DENND4CQ5VZ89 1909 aa13.48□□□□□ -0.25
LSM5-201ENST00000223084 ZNF638Q14966 1978 aaKnown RBP13.47□□□□□ -0.25
LSM5-201ENST00000223084 TRIM66O15016 1216 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 AP1G2O75843 785 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 F11P03951 625 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 FCARP24071 287 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 ANXA13P27216 316 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 ADORA2BP29275 332 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 CDC25CP30307 473 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 VIPR2P41587 438 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 USP46P62068 366 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 SIGLEC14Q08ET2 396 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 CUL2Q13617 745 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 CAVIN1Q6NZI2 390 aaKnown RBP13.47□□□□□ -0.25
LSM5-201ENST00000223084 SASS6Q6UVJ0 657 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 TRIM67Q6ZTA4 783 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 ARHGEF19Q8IW93 802 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 EHBP1Q8NDI1 1231 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 ZSCAN18Q8TBC5 510 aaPredicted RBP13.47□□□□□ -0.25
LSM5-201ENST00000223084 NXPE3Q969Y0 559 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 FAXDC2Q96IV6 333 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 SPATA17Q96L03 361 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 C8orf48Q96LL4 319 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 ASB16Q96NS5 453 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 GCNAQ96QF7 691 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 KCNK16Q96T55 309 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 CRACR2AQ9BSW2 395 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 C1QTNF1Q9BXJ1 281 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 KRT82Q9NSB4 513 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 SAMSN1Q9NSI8 373 aaKnown RBP13.47□□□□□ -0.25
LSM5-201ENST00000223084 DUSP12Q9UNI6 340 aa13.47□□□□□ -0.25
LSM5-201ENST00000223084 OBSL1O75147 1896 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 NCANO14594 1321 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 ATP8B3O60423 1300 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 TMEM221A6NGB7 291 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 M0R296 226 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 P4HA2O15460 535 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 TADA3O75528 432 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 BEST1O76090 585 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 FGF19O95750 216 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 RAD23BP54727 409 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 CETN1Q12798 172 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 IFRD2Q12894 506 aaPredicted RBP13.46□□□□□ -0.25
LSM5-201ENST00000223084 GRM2Q14416 872 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 ARHGAP15Q53QZ3 475 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 TMEM31Q5JXX7 168 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 TXNDC8Q6A555 127 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 DENND5BQ6ZUT9 1274 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 RRAGAQ7L523 313 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 UBALD2Q8IYN6 164 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 SLC4A11Q8NBS3 891 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 ZMIZ2Q8NF64 920 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 SMARCD2Q92925 531 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 RSPRY1Q96DX4 576 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 CYFIP2Q96F07 1278 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 ASIC4Q96FT7 647 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 TMEM176AQ96HP8 235 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 MYRFLQ96LU7 910 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 HEXIM2Q96MH2 286 aaKnown RBP13.46□□□□□ -0.25
LSM5-201ENST00000223084 NT5C1BQ96P26 610 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 SMOQ99835 787 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 SLC46A2Q9BY10 475 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 INTS2Q9H0H0 1204 aaKnown RBP13.46□□□□□ -0.25
LSM5-201ENST00000223084 SMG9Q9H0W8 520 aaKnown RBP13.46□□□□□ -0.25
LSM5-201ENST00000223084 TASP1Q9H6P5 420 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 ZFP14Q9HCL3 533 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 NFE2L3Q9Y4A8 694 aa13.46□□□□□ -0.25
LSM5-201ENST00000223084 ANAPC1Q9H1A4 1944 aa13.45□□□□□ -0.26
LSM5-201ENST00000223084 GPR37L1O60883 481 aa13.45□□□□□ -0.26
LSM5-201ENST00000223084 ECI2O75521 394 aa13.45□□□□□ -0.26
LSM5-201ENST00000223084 PDGFBP01127 241 aaPredicted RBP13.45□□□□□ -0.26
LSM5-201ENST00000223084 CFHP08603 1231 aa13.45□□□□□ -0.26
LSM5-201ENST00000223084 MAP3K7CLP57077 242 aa13.45□□□□□ -0.26
LSM5-201ENST00000223084 GPC5P78333 572 aa13.45□□□□□ -0.26
LSM5-201ENST00000223084 APBA1Q02410 837 aa13.45□□□□□ -0.26
LSM5-201ENST00000223084 STX1AQ16623 288 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms