RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 FDFT1P37268 417 aa11.52□□□□□ -0.57
KNOP1-201ENST00000219837 MAGEA4P43358 317 aa11.52□□□□□ -0.57
KNOP1-201ENST00000219837 NAB2Q15742 525 aa11.52□□□□□ -0.57
KNOP1-201ENST00000219837 DNAL1Q4LDG9 190 aa11.52□□□□□ -0.57
KNOP1-201ENST00000219837 IGDCC4Q8TDY8 1250 aa11.52□□□□□ -0.57
KNOP1-201ENST00000219837 DPF2Q92785 391 aa11.52□□□□□ -0.57
KNOP1-201ENST00000219837 AGPAT5Q9NUQ2 364 aa11.52□□□□□ -0.57
KNOP1-201ENST00000219837 SCN3BQ9NY72 215 aa11.52□□□□□ -0.57
KNOP1-201ENST00000219837 STX7O15400 261 aaKnown RBP11.51□□□□□ -0.57
KNOP1-201ENST00000219837 RASA1P20936 1047 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 PRIM2P49643 509 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 CUL2Q13617 745 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 MTFR1Q15390 333 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 TIGD7Q6NT04 549 aaPredicted RBP11.51□□□□□ -0.57
KNOP1-201ENST00000219837 TRAPPC11Q7Z392 1133 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 DDI1Q8WTU0 396 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 CNBD2Q96M20 576 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 PAPOLBQ9NRJ5 636 aaKnown RBP11.51□□□□□ -0.57
KNOP1-201ENST00000219837 SNX12Q9UMY4 172 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 CPSF4O95639 269 aaKnown RBP11.51□□□□□ -0.57
KNOP1-201ENST00000219837 SLC2A3P11169 496 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 NPEPPSP55786 919 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 RPS7P62081 194 aaKnown RBP11.51□□□□□ -0.57
KNOP1-201ENST00000219837 CCDC81Q6ZN84 652 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 RINLQ6ZS11 566 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 KIAA2013Q8IYS2 634 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 KRT78Q8N1N4 520 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 MRPS31Q92665 395 aaKnown RBP11.51□□□□□ -0.57
KNOP1-201ENST00000219837 INPP5DQ92835 1189 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 PCDHB12Q9Y5F1 795 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 RASSF10A6NK89 507 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 KLHL2O95198 593 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 PCDH8O95206 1070 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 STAU1O95793 577 aaKnown RBP11.51□□□□□ -0.57
KNOP1-201ENST00000219837 ICAM1P05362 532 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 NME5P56597 212 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 NBPF9Q3BBW0 867 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 ACAD10Q6JQN1 1059 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 PRUNE1Q86TP1 453 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 USP13Q92995 863 aaPredicted RBP11.51□□□□□ -0.57
KNOP1-201ENST00000219837 TADA1Q96BN2 335 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 CHP1Q99653 195 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 EMILIN2Q9BXX0 1053 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 MTMR12Q9C0I1 747 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 DDIT4Q9NX09 232 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 UBQLN1Q9UMX0 589 aaKnown RBP11.51□□□□□ -0.57
KNOP1-201ENST00000219837 MYO3AQ8NEV4 1616 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 CASTOR2A6NHX0 329 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 CST8O60676 142 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 EPHB2P29323 1055 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 CTCFP49711 727 aaPredicted RBP11.51□□□□□ -0.57
KNOP1-201ENST00000219837 ZNF484Q5JVG2 852 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 VPS37AQ8NEZ2 397 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 ZNF473Q8WTR7 871 aaKnown RBP11.51□□□□□ -0.57
KNOP1-201ENST00000219837 EME1Q96AY2 570 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 ZNF669Q96BR6 464 aaPredicted RBP11.51□□□□□ -0.57
KNOP1-201ENST00000219837 GPRASP2Q96D09 838 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 MED8Q96G25 268 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 THTPAQ9BU02 230 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 IARS2Q9NSE4 1012 aaKnown RBP11.51□□□□□ -0.57
KNOP1-201ENST00000219837 GEMIN4P57678 1058 aaKnown RBP11.51□□□□□ -0.57
KNOP1-201ENST00000219837 EFEMP1Q12805 493 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 PLD1Q13393 1074 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 DYNC1I2Q13409 638 aaKnown RBP11.51□□□□□ -0.57
KNOP1-201ENST00000219837 PDIA6Q15084 440 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 TTLL9Q3SXZ7 439 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 FGD2Q7Z6J4 655 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 ACOT1Q86TX2 421 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 IFNLR1Q8IU57 520 aaPredicted RBP11.51□□□□□ -0.57
KNOP1-201ENST00000219837 SLC44A2Q8IWA5 706 aaPredicted RBP11.51□□□□□ -0.57
KNOP1-201ENST00000219837 OPTNQ96CV9 577 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 KLF6Q99612 283 aaPredicted RBP11.51□□□□□ -0.57
KNOP1-201ENST00000219837 LZTS1Q9Y250 596 aa11.51□□□□□ -0.57
KNOP1-201ENST00000219837 TRPC5OSA6NMA1 111 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 RNF103O00237 685 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 SGPL1O95470 568 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 NFICP08651 508 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 EPHX2P34913 555 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 GPC1P35052 558 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 MRPS15P82914 257 aaKnown RBP11.5□□□□□ -0.57
KNOP1-201ENST00000219837 C9orf131Q5VYM1 1079 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 C4orf22Q6V702 233 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 EFL1Q7Z2Z2 1120 aaKnown RBP11.5□□□□□ -0.57
KNOP1-201ENST00000219837 ARMC2Q8NEN0 867 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 OR2W6PQ8NHA6 318 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 RBBP8Q99708 897 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 ECSITQ9BQ95 431 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 EPN3Q9H201 632 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 RMND5AQ9H871 391 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 MPP6Q9NZW5 540 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 CPA4Q9UI42 421 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 ADAM21Q9UKJ8 722 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 FYNP06241 537 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 SNRPAP09012 282 aaKnown RBP11.5□□□□□ -0.57
KNOP1-201ENST00000219837 MDH1P40925 334 aaKnown RBP11.5□□□□□ -0.57
KNOP1-201ENST00000219837 SERPINB4P48594 390 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 EXOSC10Q01780 885 aaKnown RBP11.5□□□□□ -0.57
KNOP1-201ENST00000219837 ZNF34Q8IZ26 560 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 CYFIP2Q96F07 1278 aa11.5□□□□□ -0.57
KNOP1-201ENST00000219837 CCDC3Q9BQI4 270 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms