RNA–Protein interactions for RNA: ENST00000217999.2

RHOXF1-201, Transcript of Rhox homeobox family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHOXF1, Length 769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1-201ENST00000217999 MYL6P60660 151 aa15.3■□□□□ 0.04
RHOXF1-201ENST00000217999 AMPD2Q01433 879 aa15.3■□□□□ 0.04
RHOXF1-201ENST00000217999 NCOA4Q13772 614 aa15.3■□□□□ 0.04
RHOXF1-201ENST00000217999 ZNF268Q14587 947 aaPredicted RBP15.3■□□□□ 0.04
RHOXF1-201ENST00000217999 ITPRIPL2Q3MIP1 535 aa15.3■□□□□ 0.04
RHOXF1-201ENST00000217999 DGKKQ5KSL6 1271 aa15.3■□□□□ 0.04
RHOXF1-201ENST00000217999 RIF1Q5UIP0 2472 aaKnown RBP15.3■□□□□ 0.04
RHOXF1-201ENST00000217999 TDRD10Q5VZ19 366 aaKnown RBP15.3■□□□□ 0.04
RHOXF1-201ENST00000217999 CEP135Q66GS9 1140 aa15.3■□□□□ 0.04
RHOXF1-201ENST00000217999 TXNDC8Q6A555 127 aa15.3■□□□□ 0.04
RHOXF1-201ENST00000217999 KRBA2Q6ZNG9 492 aa15.3■□□□□ 0.04
RHOXF1-201ENST00000217999 PARD3BQ8TEW8 1205 aa15.3■□□□□ 0.04
RHOXF1-201ENST00000217999 ATRIPQ8WXE1 791 aa15.3■□□□□ 0.04
RHOXF1-201ENST00000217999 HINFPQ9BQA5 517 aa15.3■□□□□ 0.04
RHOXF1-201ENST00000217999 SLC46A2Q9BY10 475 aa15.3■□□□□ 0.04
RHOXF1-201ENST00000217999 KCTD10Q9H3F6 313 aa15.3■□□□□ 0.04
RHOXF1-201ENST00000217999 VRTNQ9H8Y1 702 aa15.3■□□□□ 0.04
RHOXF1-201ENST00000217999 CRTAC1Q9NQ79 661 aa15.3■□□□□ 0.04
RHOXF1-201ENST00000217999 PRMT8Q9NR22 394 aaPredicted RBP15.3■□□□□ 0.04
RHOXF1-201ENST00000217999 CACNA1IQ9P0X4 2223 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 HCRTO43612 131 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 ATP2C2O75185 946 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 CST3P01034 146 aaPredicted RBP15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 KRT13P13646 458 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 PFKLP17858 780 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 BDNFP23560 247 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 LMO2P25791 158 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 RPL13P26373 211 aaKnown RBP15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 PIK3CAP42336 1068 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 CASP4P49662 377 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 FAM160A1Q05DH4 1040 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 MTAPQ13126 283 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 PDGFRLQ15198 375 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 DENND5BQ6ZUT9 1274 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 TMEM150AQ86TG1 271 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 GPIHBP1Q8IV16 184 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 ADSSL1Q8N142 457 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 B3GALNT2Q8NCR0 500 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 STKLD1Q8NE28 680 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 TMC2Q8TDI7 906 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 TAF4BQ92750 862 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 PCED1BQ96HM7 432 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 ZFYVE19Q96K21 471 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 TNIP3Q96KP6 325 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 MRPL45Q9BRJ2 306 aaKnown RBP15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 DNAI2Q9GZS0 605 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 SMG9Q9H0W8 520 aaKnown RBP15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 DMAC2Q9NW81 257 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 ZSCAN32Q9NX65 697 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 TRPM5Q9NZQ8 1165 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 TRAF3IP3Q9Y228 551 aa15.29■□□□□ 0.04
RHOXF1-201ENST00000217999 HELZP42694 1942 aaKnown RBP15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 MAPK13O15264 365 aa15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 TADA3O75528 432 aa15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 PTPN1P18031 435 aaKnown RBP15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 NR2F2P24468 414 aa15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 PPP3CCP48454 512 aa15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 CLDN10P78369 228 aa15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 NUCB2P80303 420 aa15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 DPYDQ12882 1025 aa15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 CCDC142Q17RM4 750 aa15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 SCARA3Q6AZY7 606 aa15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 SCARA5Q6ZMJ2 495 aa15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 INTS8Q75QN2 995 aaKnown RBP15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 GUF1Q8N442 669 aaKnown RBP15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 CPA6Q8N4T0 437 aa15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 CCDC150Q8NCX0 1101 aa15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 USP13Q92995 863 aaPredicted RBP15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 SECISBP2LQ93073 1101 aaKnown RBP15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 C8orf48Q96LL4 319 aa15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 SLITRK1Q96PX8 696 aa15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 XYLT2Q9H1B5 865 aa15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 LMAN1LQ9HAT1 526 aa15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 RMND1Q9NWS8 449 aa15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 GTSE1Q9NYZ3 720 aa15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 HOOK1Q9UJC3 728 aaKnown RBP15.28■□□□□ 0.04
RHOXF1-201ENST00000217999 SHISA7A6NL88 538 aa15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 IKBKBO14920 756 aa15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 ZNF202O95125 648 aa15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 PRR29P0C7W0 189 aa15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 SOX9P48436 509 aa15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 NOP14P78316 857 aaKnown RBP15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 USP4Q13107 963 aa15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 MTF1Q14872 753 aa15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 NFIL3Q16649 462 aa15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 SGSM1Q2NKQ1 1148 aa15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 MAMSTRQ6ZN01 415 aa15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 MAML2Q8IZL2 1156 aaPredicted RBP15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 SYNPOQ8N3V7 929 aa15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 SPEM1Q8N4L4 309 aa15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 TTC16Q8NEE8 873 aa15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 TTC8Q8TAM2 541 aa15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 ZNF516Q92618 1163 aa15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 ATP2A3Q93084 1043 aa15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 CHAMP1Q96JM3 812 aa15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 GTPBP4Q9BZE4 634 aaKnown RBP15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 GZF1Q9H116 711 aaPredicted RBP15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 GOLPH3LQ9H4A5 285 aa15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 SMYD3Q9H7B4 428 aa15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 GKN1Q9NS71 199 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms