RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 ZNF276Q8N554 614 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 ARFGAP1Q8N6T3 406 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 FAM13CQ8NE31 585 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 FBXO36Q8NEA4 188 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 ACO2Q99798 780 aaKnown RBP13.95□□□□□ -0.18
SRP54-201ENST00000216774 WDR83Q9BRX9 315 aaKnown RBP13.95□□□□□ -0.18
SRP54-201ENST00000216774 XYLT2Q9H1B5 865 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 ZWILCHQ9H900 591 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 STK32BQ9NY57 414 aa13.95□□□□□ -0.18
SRP54-201ENST00000216774 SAE1Q9UBE0 346 aaPredicted RBP13.95□□□□□ -0.18
SRP54-201ENST00000216774 CPSF3Q9UKF6 684 aaKnown RBP13.95□□□□□ -0.18
SRP54-201ENST00000216774 TTLL13PA6NNM8 815 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 APOC4-APOC2K7ER74 178 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 LUC7L3O95232 432 aaKnown RBP13.94□□□□□ -0.18
SRP54-201ENST00000216774 APOC2P02655 101 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 WEE2P0C1S8 567 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 GNAZP19086 355 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 GAD2Q05329 585 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 MAPK6Q16659 721 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 SMTNL2Q2TAL5 461 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 TAF1BQ53T94 588 aaPredicted RBP13.94□□□□□ -0.18
SRP54-201ENST00000216774 NBPF12Q5TAG4 269 aaPredicted RBP13.94□□□□□ -0.18
SRP54-201ENST00000216774 FAM160B1Q5W0V3 765 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 CLNKQ7Z7G1 428 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 ZBTB33Q86T24 672 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 LONP2Q86WA8 852 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 TCP10LQ8TDR4 215 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 STK32AQ8WU08 396 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 PRPF31Q8WWY3 499 aaKnown RBP13.94□□□□□ -0.18
SRP54-201ENST00000216774 CYTH2Q99418 400 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 PCYT2Q99447 389 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 NPHS2Q9NP85 383 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 LIN7AO14910 233 aaPredicted RBP13.94□□□□□ -0.18
SRP54-201ENST00000216774 PEX11AO75192 247 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 PTPN4P29074 926 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 ACAP1Q15027 740 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 ZNF449Q6P9G9 518 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 ENDOVQ8N8Q3 282 aaKnown RBP13.94□□□□□ -0.18
SRP54-201ENST00000216774 CFAP61Q8NHU2 1237 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 JDP2Q8WYK2 163 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 TUBB6Q9BUF5 446 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 HOXC10Q9NYD6 342 aa13.94□□□□□ -0.18
SRP54-201ENST00000216774 XPO7Q9UIA9 1087 aaKnown RBP13.94□□□□□ -0.18
SRP54-201ENST00000216774 LCTP09848 1927 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 ABLIM1O14639 778 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 TMEM63AO94886 807 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 HOXC6P09630 235 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 UBA1P22314 1058 aaKnown RBP13.93□□□□□ -0.18
SRP54-201ENST00000216774 PSMC1P62191 440 aaKnown RBP13.93□□□□□ -0.18
SRP54-201ENST00000216774 TFAMQ00059 246 aaKnown RBP13.93□□□□□ -0.18
SRP54-201ENST00000216774 CTC1Q2NKJ3 1217 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 KCNT1Q5JUK3 1230 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 WDR78Q5VTH9 848 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 IER5Q5VY09 327 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 CHST13Q8NET6 341 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 CMASQ8NFW8 434 aaPredicted RBP13.93□□□□□ -0.18
SRP54-201ENST00000216774 JOSD2Q8TAC2 188 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 FAXDC2Q96IV6 333 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 WRNIP1Q96S55 665 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 MANSC1Q9H8J5 431 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.93□□□□□ -0.18
SRP54-201ENST00000216774 IQANK1A0A1B0GTG1 560 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 MCF2LO15068 1137 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 GAS2O43903 313 aaKnown RBP13.93□□□□□ -0.18
SRP54-201ENST00000216774 B4GALT4O60513 344 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 SPAG6O75602 509 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 FARP2O94887 1054 aaPredicted RBP13.93□□□□□ -0.18
SRP54-201ENST00000216774 CBX6O95503 412 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 TNNC2P02585 160 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 STAT5BP51692 787 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 EIF3EP60228 445 aaKnown RBP13.93□□□□□ -0.18
SRP54-201ENST00000216774 CBLBQ13191 982 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 MXD4Q14582 209 aaPredicted RBP13.93□□□□□ -0.18
SRP54-201ENST00000216774 BBS9Q3SYG4 887 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 PLEKHG4Q58EX7 1191 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 SCARA5Q6ZMJ2 495 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 MTDHQ86UE4 582 aaKnown RBP13.93□□□□□ -0.18
SRP54-201ENST00000216774 CHSY1Q86X52 802 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 ZBTB8OSQ8IWT0 167 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 UNC45BQ8IWX7 931 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 KIAA0319LQ8IZA0 1049 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 KCTD6Q8NC69 237 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 TRIM55Q9BYV6 548 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 ADAM33Q9BZ11 813 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 NKX1-2Q9UD57 310 aaPredicted RBP13.93□□□□□ -0.18
SRP54-201ENST00000216774 HACL1Q9UJ83 578 aa13.93□□□□□ -0.18
SRP54-201ENST00000216774 SPDYE16A6NNV3 312 aaPredicted RBP13.92□□□□□ -0.18
SRP54-201ENST00000216774 TGDSO95455 350 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 LMNAP02545 664 aaKnown RBP13.92□□□□□ -0.18
SRP54-201ENST00000216774 MT-ND3P03897 115 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 PRKCBP05771 671 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 DHRS4L1P0CG22 281 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 TPBGLP0DKB5 382 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 CD19P15391 556 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 EPHB2P29323 1055 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 STIP1P31948 543 aaKnown RBP13.92□□□□□ -0.18
SRP54-201ENST00000216774 XYLT1Q86Y38 959 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 FAM71DQ8N9W8 422 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 ANKRD36BP1Q96IX9 119 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 FAM167AQ96KS9 214 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms