RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 UBA3Q8TBC4 463 aa10.55□□□□□ -0.72
RTCB-201ENST00000216038 SLC2A14Q8TDB8 520 aa10.55□□□□□ -0.72
RTCB-201ENST00000216038 CPA5Q8WXQ8 436 aa10.55□□□□□ -0.72
RTCB-201ENST00000216038 CYFIP2Q96F07 1278 aa10.55□□□□□ -0.72
RTCB-201ENST00000216038 TNIP3Q96KP6 325 aa10.55□□□□□ -0.72
RTCB-201ENST00000216038 SYT11Q9BT88 431 aa10.55□□□□□ -0.72
RTCB-201ENST00000216038 TMLHEQ9NVH6 421 aa10.55□□□□□ -0.72
RTCB-201ENST00000216038 EPN1Q9Y6I3 576 aaPredicted RBP10.55□□□□□ -0.72
RTCB-201ENST00000216038 SPTBN5Q9NRC6 3674 aaKnown RBP10.54□□□□□ -0.72
RTCB-201ENST00000216038 A0A0U1RQJ8 604 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 ARHGAP6O43182 974 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 ZSCAN12O43309 604 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 OAZ2O95190 189 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 EFEMP2O95967 443 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 SOD2P04179 222 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 VDRP11473 427 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 PAX3P23760 479 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 PCSK1P29120 753 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 PPM1AP35813 382 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 KRT17Q04695 432 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 SLC39A12Q504Y0 691 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 C2CD6Q53TS8 623 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 RSRC2Q7L4I2 434 aaKnown RBP10.54□□□□□ -0.72
RTCB-201ENST00000216038 TDHQ8IZJ6 230 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 CRYBG2Q8N1P7 616 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 THEM5Q8N1Q8 247 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 SLC30A5Q8TAD4 765 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 ATRIPQ8WXE1 791 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 PGLYRP2Q96PD5 576 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 ACBD6Q9BR61 282 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 NKX2-4Q9H2Z4 354 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 TSPAN16Q9UKR8 245 aa10.54□□□□□ -0.72
RTCB-201ENST00000216038 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.53□□□□□ -0.72
RTCB-201ENST00000216038 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.53□□□□□ -0.72
RTCB-201ENST00000216038 SSU72P8A0A1W2PR75 194 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 ARHGEF37A1IGU5 675 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 M0QYV0 167 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 O00370 1275 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 ADAM12O43184 909 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 SEC31AO94979 1220 aaKnown RBP10.53□□□□□ -0.72
RTCB-201ENST00000216038 MLLT1Q03111 559 aaPredicted RBP10.53□□□□□ -0.72
RTCB-201ENST00000216038 TAP1Q03518 808 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 SLC18A3Q16572 532 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 GOLGA7BQ2TAP0 167 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 INTS6LQ5JSJ4 861 aaKnown RBP10.53□□□□□ -0.72
RTCB-201ENST00000216038 NAA35Q5VZE5 725 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 DENND1BQ6P3S1 775 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 HDXQ7Z353 690 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 TADA2BQ86TJ2 420 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 DDX53Q86TM3 631 aaKnown RBP10.53□□□□□ -0.72
RTCB-201ENST00000216038 VPS36Q86VN1 386 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 RNF168Q8IYW5 571 aaPredicted RBP10.53□□□□□ -0.72
RTCB-201ENST00000216038 FUKQ8N0W3 1084 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 LRRN4CLQ8ND94 238 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 PCED1BQ96HM7 432 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 MED10Q9BTT4 135 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 FAM124BQ9H5Z6 455 aaPredicted RBP10.53□□□□□ -0.72
RTCB-201ENST00000216038 CHST7Q9NS84 486 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 CDH9Q9ULB4 789 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.53□□□□□ -0.72
RTCB-201ENST00000216038 PCDHGC5Q9Y5F6 944 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 PCDHA11Q9Y5I1 949 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 CDY1Q9Y6F8 540 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 PIK3R2O00459 728 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 MICAL2O94851 1124 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 CPB1P15086 417 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 DNAJB1P25685 340 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 CYLC1P35663 651 aaPredicted RBP10.53□□□□□ -0.72
RTCB-201ENST00000216038 GLUD2P49448 558 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 TSPY1Q01534 308 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 MRPL58Q14197 206 aaKnown RBP10.53□□□□□ -0.72
RTCB-201ENST00000216038 PSMD5Q16401 504 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 LONRF2Q1L5Z9 754 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 DNAJC21Q5F1R6 531 aaKnown RBP10.53□□□□□ -0.72
RTCB-201ENST00000216038 CCDC122Q5T0U0 273 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 ZNF280DQ6N043 979 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 ALKBH5Q6P6C2 394 aaKnown RBP10.53□□□□□ -0.72
RTCB-201ENST00000216038 PAQR9Q6ZVX9 377 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 ANKS3Q6ZW76 656 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 TMC7Q7Z402 723 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 PHLDB2Q86SQ0 1253 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 TTC30AQ86WT1 665 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 CCDC170Q8IYT3 715 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 C1orf131Q8NDD1 294 aaKnown RBP10.53□□□□□ -0.72
RTCB-201ENST00000216038 MYCBPAPQ8TBZ2 947 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 MYLPFQ96A32 169 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 PACSIN1Q9BY11 444 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 B3GNT5Q9BYG0 378 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 ZNF518BQ9C0D4 1074 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 NAGPAQ9UK23 515 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 SUFUQ9UMX1 484 aa10.53□□□□□ -0.72
RTCB-201ENST00000216038 REXO2Q9Y3B8 237 aaKnown RBP10.53□□□□□ -0.72
RTCB-201ENST00000216038 PTPRDP23468 1912 aa10.52□□□□□ -0.73
RTCB-201ENST00000216038 MED7O43513 233 aa10.52□□□□□ -0.73
RTCB-201ENST00000216038 ERLIN1O75477 346 aa10.52□□□□□ -0.73
RTCB-201ENST00000216038 BEST1O76090 585 aa10.52□□□□□ -0.73
RTCB-201ENST00000216038 URI1O94763 535 aaPredicted RBP10.52□□□□□ -0.73
RTCB-201ENST00000216038 URODP06132 367 aa10.52□□□□□ -0.73
RTCB-201ENST00000216038 FAM163BP0C2L3 166 aa10.52□□□□□ -0.73
RTCB-201ENST00000216038 BMP8BP34820 402 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms