RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 SERPINB12Q96P63 405 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 PITPNM3Q9BZ71 974 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 ROPN1BQ9BZX4 212 aaPredicted RBP13.8□□□□□ -0.2
CTNS-201ENST00000046640 ELOVL4Q9GZR5 314 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 ROPN1Q9HAT0 212 aaPredicted RBP13.8□□□□□ -0.2
CTNS-201ENST00000046640 ETNK1Q9HBU6 452 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 SLCO1B3Q9NPD5 702 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 ARL2BPQ9Y2Y0 163 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.8□□□□□ -0.2
CTNS-201ENST00000046640 M0QYV0 167 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 HBP1O60381 514 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 C22orf31O95567 290 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 PROZP22891 400 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 MAGEA4P43358 317 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 GDF10P55107 478 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 MOGSQ13724 837 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 TNFAIP8L3Q5GJ75 292 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 MFSD5Q6N075 450 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.8□□□□□ -0.2
CTNS-201ENST00000046640 CROCCP2Q86T23 111 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 C12orf29Q8N999 325 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 CKAP2Q8WWK9 683 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 RBM41Q96IZ5 413 aaKnown RBP13.8□□□□□ -0.2
CTNS-201ENST00000046640 TMEM109Q9BVC6 243 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 ERAP1Q9NZ08 941 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 KLHL14Q9P2G3 628 aa13.8□□□□□ -0.2
CTNS-201ENST00000046640 PTPRFP10586 1907 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 DNAJC25-GNG10A0A024R161 153 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 CXCL11O14625 94 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 CST8O60676 142 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 MAP3K6O95382 1288 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 LGALS2P05162 132 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 OSBPP22059 807 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 EIF4BP23588 611 aaKnown RBP13.79□□□□□ -0.2
CTNS-201ENST00000046640 TFDP3Q5H9I0 405 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 C9orf131Q5VYM1 1079 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 ZNF449Q6P9G9 518 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 FAM167BQ9BTA0 163 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 CALN1Q9BXU9 219 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 CCDC134Q9H6E4 229 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 VPS37BQ9H9H4 285 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 hCG_1818297A0A087WSY0 165 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 WDR91A4D1P6 747 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 CFAP73A6NFT4 308 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 LRCH4O75427 683 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 ARF4P18085 180 aaPredicted RBP13.79□□□□□ -0.2
CTNS-201ENST00000046640 CDKN2BP42772 138 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 RGS7P49802 495 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 ZBED8Q8IZ13 594 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 SLC4A11Q8NBS3 891 aa13.79□□□□□ -0.2
CTNS-201ENST00000046640 PIWIL1Q96J94 861 aaKnown RBP13.79□□□□□ -0.2
CTNS-201ENST00000046640 B4GALT4O60513 344 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 LSM8O95777 96 aaKnown RBP13.78□□□□□ -0.2
CTNS-201ENST00000046640 OAS1P00973 400 aaKnown RBP13.78□□□□□ -0.2
CTNS-201ENST00000046640 TARSP26639 723 aaKnown RBP13.78□□□□□ -0.2
CTNS-201ENST00000046640 MSH2P43246 934 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 OTUD4Q01804 1114 aaKnown RBP13.78□□□□□ -0.2
CTNS-201ENST00000046640 BNIP1Q12981 228 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 PIGHQ14442 188 aaPredicted RBP13.78□□□□□ -0.2
CTNS-201ENST00000046640 SLC10A6Q3KNW5 377 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 PPP1R15BQ5SWA1 713 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 MAP1SQ66K74 1059 aaPredicted RBP13.78□□□□□ -0.2
CTNS-201ENST00000046640 TLDC1Q6P9B6 456 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 SYDE1Q6ZW31 735 aaPredicted RBP13.78□□□□□ -0.2
CTNS-201ENST00000046640 VSIG1Q86XK7 387 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 ECHDC2Q86YB7 292 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 ACTL9Q8TC94 416 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 MICAL2O94851 1124 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 KRT15P19012 456 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 ATP5DP30049 168 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 YWHAEP62258 255 aaKnown RBP13.78□□□□□ -0.2
CTNS-201ENST00000046640 ARHGAP1Q07960 439 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 MMRN1Q13201 1228 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 TRIM68Q6AZZ1 485 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 HPDLQ96IR7 371 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 LPIN3Q9BQK8 851 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 FAM49AQ9H0Q0 323 aaPredicted RBP13.78□□□□□ -0.2
CTNS-201ENST00000046640 HAO1Q9UJM8 370 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 TNFSF13BQ9Y275 285 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 C15orf41Q9Y2V0 281 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 HES2Q9Y543 173 aa13.78□□□□□ -0.2
CTNS-201ENST00000046640 A0A1B0GUA9 196 aa13.77□□□□□ -0.2
CTNS-201ENST00000046640 ADORA2AP29274 412 aa13.77□□□□□ -0.2
CTNS-201ENST00000046640 PTPN11Q06124 597 aaPredicted RBP13.77□□□□□ -0.2
CTNS-201ENST00000046640 SURF1Q15526 300 aa13.77□□□□□ -0.2
CTNS-201ENST00000046640 AMHR2Q16671 573 aa13.77□□□□□ -0.2
CTNS-201ENST00000046640 KIZQ2M2Z5 673 aa13.77□□□□□ -0.2
CTNS-201ENST00000046640 FAM102AQ5T9C2 384 aaPredicted RBP13.77□□□□□ -0.2
CTNS-201ENST00000046640 KCTD6Q8NC69 237 aa13.77□□□□□ -0.2
CTNS-201ENST00000046640 MAGEC3Q8TD91 643 aa13.77□□□□□ -0.2
CTNS-201ENST00000046640 PDZD7Q9H5P4 517 aa13.77□□□□□ -0.2
CTNS-201ENST00000046640 EXOC1LA0A1B0GW35 172 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 H0Y3Z8 333 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 PHKA2P46019 1235 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 ATP11AP98196 1134 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 PDIA2Q13087 525 aaKnown RBP13.77□□□□□ -0.21
CTNS-201ENST00000046640 ZNF268Q14587 947 aaPredicted RBP13.77□□□□□ -0.21
CTNS-201ENST00000046640 C15orf59Q2T9L4 293 aaPredicted RBP13.77□□□□□ -0.21
CTNS-201ENST00000046640 GALNTL6Q49A17 601 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 GLRA4Q5JXX5 417 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms