RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 PVALEFA0A1B0GWK0 134 aa16.99■□□□□ 0.31
ERCC1-201ENST00000013807 CHURC1-FNTBB4DL54 471 aa16.99■□□□□ 0.31
ERCC1-201ENST00000013807 HCRTO43612 131 aa16.99■□□□□ 0.31
ERCC1-201ENST00000013807 CST3P01034 146 aaPredicted RBP16.99■□□□□ 0.31
ERCC1-201ENST00000013807 DMWDQ09019 674 aa16.99■□□□□ 0.31
ERCC1-201ENST00000013807 ZNF77Q15935 545 aa16.99■□□□□ 0.31
ERCC1-201ENST00000013807 LMBRD2Q68DH5 695 aaPredicted RBP16.99■□□□□ 0.31
ERCC1-201ENST00000013807 FSTL4Q6MZW2 842 aa16.99■□□□□ 0.31
ERCC1-201ENST00000013807 WDR5BQ86VZ2 330 aa16.99■□□□□ 0.31
ERCC1-201ENST00000013807 FSIP1Q8NA03 581 aa16.99■□□□□ 0.31
ERCC1-201ENST00000013807 OSCP1Q8WVF1 389 aa16.99■□□□□ 0.31
ERCC1-201ENST00000013807 DHX58Q96C10 678 aa16.99■□□□□ 0.31
ERCC1-201ENST00000013807 SYT15Q9BQS2 421 aa16.99■□□□□ 0.31
ERCC1-201ENST00000013807 EBF3Q9H4W6 596 aa16.99■□□□□ 0.31
ERCC1-201ENST00000013807 PARD6AQ9NPB6 346 aa16.99■□□□□ 0.31
ERCC1-201ENST00000013807 CRTAC1Q9NQ79 661 aa16.99■□□□□ 0.31
ERCC1-201ENST00000013807 C2orf42Q9NWW7 574 aa16.99■□□□□ 0.31
ERCC1-201ENST00000013807 MAGED2Q9UNF1 606 aaPredicted RBP16.99■□□□□ 0.31
ERCC1-201ENST00000013807 R3HCC1Q9Y3T6 440 aaKnown RBP16.99■□□□□ 0.31
ERCC1-201ENST00000013807 MYH10P35580 1976 aa16.98■□□□□ 0.31
ERCC1-201ENST00000013807 MYO18AQ92614 2054 aaKnown RBP16.98■□□□□ 0.31
ERCC1-201ENST00000013807 ATG13O75143 517 aa16.98■□□□□ 0.31
ERCC1-201ENST00000013807 ATP2C2O75185 946 aa16.98■□□□□ 0.31
ERCC1-201ENST00000013807 USP17L7P0C7H9 530 aa16.98■□□□□ 0.31
ERCC1-201ENST00000013807 FNTBP49356 437 aa16.98■□□□□ 0.31
ERCC1-201ENST00000013807 ASIC1P78348 528 aa16.98■□□□□ 0.31
ERCC1-201ENST00000013807 CYP24A1Q07973 514 aa16.98■□□□□ 0.31
ERCC1-201ENST00000013807 GRSF1Q12849 480 aaKnown RBP eCLIP16.98■□□□□ 0.31
ERCC1-201ENST00000013807 SIM2Q14190 667 aaPredicted RBP16.98■□□□□ 0.31
ERCC1-201ENST00000013807 CCDC142Q17RM4 750 aa16.98■□□□□ 0.31
ERCC1-201ENST00000013807 XXYLT1Q8NBI6 393 aa16.98■□□□□ 0.31
ERCC1-201ENST00000013807 STKLD1Q8NE28 680 aa16.98■□□□□ 0.31
ERCC1-201ENST00000013807 MYCBPAPQ8TBZ2 947 aa16.98■□□□□ 0.31
ERCC1-201ENST00000013807 SLC22A12Q96S37 553 aa16.98■□□□□ 0.31
ERCC1-201ENST00000013807 TTLL2Q9BWV7 592 aa16.98■□□□□ 0.31
ERCC1-201ENST00000013807 GZF1Q9H116 711 aaPredicted RBP16.98■□□□□ 0.31
ERCC1-201ENST00000013807 MAGEC2Q9UBF1 373 aaPredicted RBP16.98■□□□□ 0.31
ERCC1-201ENST00000013807 TRAV19A0A0A6YYK7 116 aa16.97■□□□□ 0.31
ERCC1-201ENST00000013807 POLR2DO15514 142 aaKnown RBP16.97■□□□□ 0.31
ERCC1-201ENST00000013807 ZSCAN22P10073 491 aaPredicted RBP16.97■□□□□ 0.31
ERCC1-201ENST00000013807 DRD1P21728 446 aa16.97■□□□□ 0.31
ERCC1-201ENST00000013807 PPP3CCP48454 512 aa16.97■□□□□ 0.31
ERCC1-201ENST00000013807 PDE6CP51160 858 aa16.97■□□□□ 0.31
ERCC1-201ENST00000013807 NOP14P78316 857 aaKnown RBP16.97■□□□□ 0.31
ERCC1-201ENST00000013807 CLDN10P78369 228 aa16.97■□□□□ 0.31
ERCC1-201ENST00000013807 USP4Q13107 963 aa16.97■□□□□ 0.31
ERCC1-201ENST00000013807 MTF1Q14872 753 aa16.97■□□□□ 0.31
ERCC1-201ENST00000013807 FBXO43Q4G163 708 aa16.97■□□□□ 0.31
ERCC1-201ENST00000013807 RESP18Q5W5W9 173 aa16.97■□□□□ 0.31
ERCC1-201ENST00000013807 TRIM68Q6AZZ1 485 aa16.97■□□□□ 0.31
ERCC1-201ENST00000013807 CC2D1AQ6P1N0 951 aaPredicted RBP16.97■□□□□ 0.31
ERCC1-201ENST00000013807 CAMKK1Q8N5S9 505 aa16.97■□□□□ 0.31
ERCC1-201ENST00000013807 NOC3LQ8WTT2 800 aaKnown RBP16.97■□□□□ 0.31
ERCC1-201ENST00000013807 EXOC4Q96A65 974 aa16.97■□□□□ 0.31
ERCC1-201ENST00000013807 PCED1BQ96HM7 432 aa16.97■□□□□ 0.31
ERCC1-201ENST00000013807 CYP2S1Q96SQ9 504 aa16.97■□□□□ 0.31
ERCC1-201ENST00000013807 CGRRF1Q99675 332 aa16.97■□□□□ 0.31
ERCC1-201ENST00000013807 ECT2Q9H8V3 914 aa16.97■□□□□ 0.31
ERCC1-201ENST00000013807 VRTNQ9H8Y1 702 aa16.97■□□□□ 0.31
ERCC1-201ENST00000013807 EHD2Q9NZN4 543 aa16.97■□□□□ 0.31
ERCC1-201ENST00000013807 PCDHA7Q9UN72 937 aa16.97■□□□□ 0.31
ERCC1-201ENST00000013807 ARHGAP26Q9UNA1 814 aa16.97■□□□□ 0.31
ERCC1-201ENST00000013807 MED19A0JLT2 244 aaPredicted RBP16.96■□□□□ 0.31
ERCC1-201ENST00000013807 FOXD2O60548 495 aaPredicted RBP16.96■□□□□ 0.31
ERCC1-201ENST00000013807 F13A1P00488 732 aa16.96■□□□□ 0.31
ERCC1-201ENST00000013807 ARSAP15289 507 aa16.96■□□□□ 0.31
ERCC1-201ENST00000013807 GJA4P35212 333 aa16.96■□□□□ 0.31
ERCC1-201ENST00000013807 GNL1P36915 607 aaPredicted RBP16.96■□□□□ 0.31
ERCC1-201ENST00000013807 GALK1P51570 392 aa16.96■□□□□ 0.31
ERCC1-201ENST00000013807 ATXN1P54253 815 aaKnown RBP16.96■□□□□ 0.31
ERCC1-201ENST00000013807 KNOP1Q1ED39 458 aaKnown RBP16.96■□□□□ 0.31
ERCC1-201ENST00000013807 EML3Q32P44 896 aa16.96■□□□□ 0.31
ERCC1-201ENST00000013807 PKN3Q6P5Z2 889 aa16.96■□□□□ 0.31
ERCC1-201ENST00000013807 DENND5BQ6ZUT9 1274 aa16.96■□□□□ 0.31
ERCC1-201ENST00000013807 ZNF516Q92618 1163 aa16.96■□□□□ 0.31
ERCC1-201ENST00000013807 C8orf48Q96LL4 319 aa16.96■□□□□ 0.31
ERCC1-201ENST00000013807 FNBP1Q96RU3 617 aa16.96■□□□□ 0.31
ERCC1-201ENST00000013807 FBRSL1Q9HCM7 1045 aaKnown RBP16.96■□□□□ 0.31
ERCC1-201ENST00000013807 RCOR1Q9UKL0 485 aa16.96■□□□□ 0.31
ERCC1-201ENST00000013807 NME7Q9Y5B8 376 aa16.96■□□□□ 0.31
ERCC1-201ENST00000013807 NUP205Q92621 2012 aa16.96■□□□□ 0.3
ERCC1-201ENST00000013807 C2orf78A6NCI8 922 aa16.95■□□□□ 0.3
ERCC1-201ENST00000013807 TRIM66O15016 1216 aa16.95■□□□□ 0.3
ERCC1-201ENST00000013807 OLFM2O95897 454 aa16.95■□□□□ 0.3
ERCC1-201ENST00000013807 PDGFRBP09619 1106 aa16.95■□□□□ 0.3
ERCC1-201ENST00000013807 HDCP19113 662 aa16.95■□□□□ 0.3
ERCC1-201ENST00000013807 TNNI1P19237 187 aa16.95■□□□□ 0.3
ERCC1-201ENST00000013807 BDNFP23560 247 aa16.95■□□□□ 0.3
ERCC1-201ENST00000013807 ATICP31939 592 aa16.95■□□□□ 0.3
ERCC1-201ENST00000013807 CSRP2Q16527 193 aa16.95■□□□□ 0.3
ERCC1-201ENST00000013807 HS2ST1Q7LGA3 356 aa16.95■□□□□ 0.3
ERCC1-201ENST00000013807 SCN4BQ8IWT1 228 aa16.95■□□□□ 0.3
ERCC1-201ENST00000013807 CPA6Q8N4T0 437 aa16.95■□□□□ 0.3
ERCC1-201ENST00000013807 ARL14EPQ8N8R7 260 aaPredicted RBP16.95■□□□□ 0.3
ERCC1-201ENST00000013807 RDH13Q8NBN7 331 aa16.95■□□□□ 0.3
ERCC1-201ENST00000013807 ATP2A3Q93084 1043 aa16.95■□□□□ 0.3
ERCC1-201ENST00000013807 MYLPFQ96A32 169 aa16.95■□□□□ 0.3
ERCC1-201ENST00000013807 LOXL4Q96JB6 756 aa16.95■□□□□ 0.3
ERCC1-201ENST00000013807 MMS19Q96T76 1030 aa16.95■□□□□ 0.3
ERCC1-201ENST00000013807 P2RY13Q9BPV8 354 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms