RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 MPZL3Q6UWV2 235 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 TMEM130Q8N3G9 435 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 RIN3Q8TB24 985 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 MSANTD3Q96H12 275 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 CCDC34Q96HJ3 373 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 ZMAT2Q96NC0 199 aaKnown RBP8.01□□□□□ -1.13
PHGDH-225ENST00000641720 GSDMAQ96QA5 445 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 ACCSQ96QU6 501 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 CORO1BQ9BR76 489 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 CBWD1Q9BRT8 395 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 DUSP15Q9H1R2 295 aaPredicted RBP8.01□□□□□ -1.13
PHGDH-225ENST00000641720 RMND1Q9NWS8 449 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 TMEM63CQ9P1W3 806 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 PARP2Q9UGN5 583 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 HOOK1Q9UJC3 728 aaKnown RBP8.01□□□□□ -1.13
PHGDH-225ENST00000641720 MAPK8IP1Q9UQF2 711 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 PCDHB13Q9Y5F0 798 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 PCDHGA5Q9Y5G8 931 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 MUC22E2RYF6 1773 aaPredicted RBP8.01□□□□□ -1.13
PHGDH-225ENST00000641720 ZNF462Q96JM2 2506 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 PTPN13Q12923 2485 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 KNTC1P50748 2209 aa8.01□□□□□ -1.13
PHGDH-225ENST00000641720 COL6A6A6NMZ7 2263 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 A0A0B4J269 797 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 LNP1A1A4G5 178 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 OTOL1A6NHN0 477 aaPredicted RBP8□□□□□ -1.13
PHGDH-225ENST00000641720 SLC38A8A6NNN8 435 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 SOBPA7XYQ1 873 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 CDX4O14627 284 aaPredicted RBP8□□□□□ -1.13
PHGDH-225ENST00000641720 AXIN1O15169 862 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 MCF2P10911 925 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 CD44P16070 742 aaKnown RBP8□□□□□ -1.13
PHGDH-225ENST00000641720 ABCD1P33897 745 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 MPLP40238 635 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 TNFSF9P41273 254 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 OSTNP61366 133 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 NCBP1Q09161 790 aaKnown RBP8□□□□□ -1.13
PHGDH-225ENST00000641720 PSMD2Q13200 908 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 TEAD2Q15562 447 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 AASDHQ4L235 1098 aaPredicted RBP8□□□□□ -1.13
PHGDH-225ENST00000641720 ZCWPW2Q504Y3 356 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 GLRA4Q5JXX5 417 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 ZNF658Q5TYW1 1059 aaPredicted RBP8□□□□□ -1.13
PHGDH-225ENST00000641720 IL31Q6EBC2 164 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 RBM43Q6ZSC3 357 aaKnown RBP8□□□□□ -1.13
PHGDH-225ENST00000641720 ANKS3Q6ZW76 656 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 STXBP4Q6ZWJ1 553 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 SYCP3Q8IZU3 236 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 ZSCAN18Q8TBC5 510 aaPredicted RBP8□□□□□ -1.13
PHGDH-225ENST00000641720 ZNF507Q8TCN5 953 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 CCDC47Q96A33 483 aaKnown RBP8□□□□□ -1.13
PHGDH-225ENST00000641720 MSTO1Q9BUK6 570 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 TRIM6Q9C030 488 aaPredicted RBP8□□□□□ -1.13
PHGDH-225ENST00000641720 KCTD10Q9H3F6 313 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 AGPAT3Q9NRZ7 376 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 GTSE1Q9NYZ3 720 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 KIAA1468Q9P260 1216 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 KCNG1Q9UIX4 513 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 FBXL5Q9UKA1 691 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 STYXL1Q9Y6J8 313 aa8□□□□□ -1.13
PHGDH-225ENST00000641720 TMEM8BA6NDV4 472 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 CLDN3O15551 220 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 AKAP3O75969 853 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 PRAMEF12O95522 483 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 CXCL8P10145 99 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 GRM5P41594 1212 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 PRCPP42785 496 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 MATR3P43243 847 aaKnown RBP eCLIP7.99□□□□□ -1.13
PHGDH-225ENST00000641720 PXNP49023 591 aaPredicted RBP7.99□□□□□ -1.13
PHGDH-225ENST00000641720 PMS1P54277 932 aaKnown RBP7.99□□□□□ -1.13
PHGDH-225ENST00000641720 WNT7BP56706 349 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 TNK2Q07912 1038 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 ZNF252P-AS1Q0IIN9 211 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 PPP2R5DQ14738 602 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 PON2Q15165 354 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 NFKBIBQ15653 356 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 ENOX2Q16206 610 aaKnown RBP7.99□□□□□ -1.13
PHGDH-225ENST00000641720 KNOP1Q1ED39 458 aaKnown RBP7.99□□□□□ -1.13
PHGDH-225ENST00000641720 KLHL40Q2TBA0 621 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 DPCR1Q3MIW9 517 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 SOWAHCQ53LP3 525 aaPredicted RBP7.99□□□□□ -1.13
PHGDH-225ENST00000641720 COBLL1Q53SF7 1204 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 DGKKQ5KSL6 1271 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 CCDC183Q5T5S1 534 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 FSTL4Q6MZW2 842 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 CAVIN1Q6NZI2 390 aaKnown RBP7.99□□□□□ -1.13
PHGDH-225ENST00000641720 GAREM2Q75VX8 874 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 RALGPS2Q86X27 583 aaPredicted RBP7.99□□□□□ -1.13
PHGDH-225ENST00000641720 GUF1Q8N442 669 aaKnown RBP7.99□□□□□ -1.13
PHGDH-225ENST00000641720 COL26A1Q96A83 441 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 SAAL1Q96ER3 474 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 ZFYVE19Q96K21 471 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 FAM84AQ96KN4 292 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 ADPGKQ9BRR6 497 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 TCHPQ9BT92 498 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 SCNM1Q9BWG6 230 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 C8orf33Q9H7E9 229 aaPredicted RBP7.99□□□□□ -1.13
PHGDH-225ENST00000641720 TMEM206Q9H813 350 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 HPS4Q9NQG7 708 aa7.99□□□□□ -1.13
PHGDH-225ENST00000641720 EXOC7Q9UPT5 735 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms