RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 AUTS2Q8WXX7 1259 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 FUBP3Q96I24 572 aaKnown RBP eCLIP13.74□□□□□ -0.21
PHGDH-218ENST00000641491 PGLYRP2Q96PD5 576 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 DNAJC7Q99615 494 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 BAG1Q99933 345 aaPredicted RBP13.74□□□□□ -0.21
PHGDH-218ENST00000641491 ZCWPW1Q9H0M4 648 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 KRT82Q9NSB4 513 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 AIPL1Q9NZN9 384 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 HMGXB4Q9UGU5 601 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 AJAP1Q9UKB5 411 aaPredicted RBP13.74□□□□□ -0.21
PHGDH-218ENST00000641491 GTF3C4Q9UKN8 822 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 AP1G2O75843 785 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 OR4Q2P0C623 313 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 SETSIPP0DME0 302 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 CCDC130P13994 396 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 RPL17P18621 184 aaKnown RBP13.73□□□□□ -0.21
PHGDH-218ENST00000641491 IGFBP6P24592 240 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-218ENST00000641491 NSFP46459 744 aaKnown RBP13.73□□□□□ -0.21
PHGDH-218ENST00000641491 ALDH1A3P47895 512 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 TUFMP49411 452 aaKnown RBP13.73□□□□□ -0.21
PHGDH-218ENST00000641491 ZNF132P52740 706 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 RPL10AP62906 217 aaKnown RBP13.73□□□□□ -0.21
PHGDH-218ENST00000641491 CDR2Q01850 454 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 TBX2Q13207 712 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-218ENST00000641491 GPR17Q13304 367 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 KIAA0319Q5VV43 1072 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 LIMS2Q7Z4I7 341 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 SCN4BQ8IWT1 228 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 RNF168Q8IYW5 571 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-218ENST00000641491 CRYBG2Q8N1P7 616 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 OR10T2Q8NGX3 314 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 MRPL38Q96DV4 380 aaKnown RBP13.73□□□□□ -0.21
PHGDH-218ENST00000641491 ASB2Q96Q27 587 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 CDCA3Q99618 268 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-218ENST00000641491 AGPAT1Q99943 283 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 HAUS4Q9H6D7 363 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 TLE6Q9H808 572 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 CYP4F11Q9HBI6 524 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 DMAP1Q9NPF5 467 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-218ENST00000641491 EHD2Q9NZN4 543 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 TSPAN16Q9UKR8 245 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 MAFFQ9ULX9 164 aa13.73□□□□□ -0.21
PHGDH-218ENST00000641491 MYBPHLA2RUH7 354 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 TEX28O15482 410 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 ARHGEF15O94989 841 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 LSM8O95777 96 aaKnown RBP13.72□□□□□ -0.21
PHGDH-218ENST00000641491 LRG1P02750 347 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 LINC00271P0C7V0 271 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 SKILP12757 684 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 DESP17661 470 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 IGFBP4P22692 258 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 ROR1Q01973 937 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 ADCY1Q08828 1119 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 GOLGA8FQ08AF8 430 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 GOLGA8DPQ0D2H9 430 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 BST2Q10589 180 aaKnown RBP13.72□□□□□ -0.21
PHGDH-218ENST00000641491 MRPL58Q14197 206 aaKnown RBP13.72□□□□□ -0.21
PHGDH-218ENST00000641491 ARHGAP17Q68EM7 881 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 SLC8B1Q6J4K2 584 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 FAM35AQ86V20 835 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 PALB2Q86YC2 1186 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 PASD1Q8IV76 773 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 UBR7Q8N806 425 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 MRPL43Q8N983 215 aaKnown RBP13.72□□□□□ -0.21
PHGDH-218ENST00000641491 C12orf29Q8N999 325 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 ADAMTS19Q8TE59 1207 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 EPS8L1Q8TE68 723 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 ZNF606Q8WXB4 792 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 GOLGA1Q92805 767 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 PCED1BQ96HM7 432 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 TWNKQ96RR1 684 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 VN1R3Q9BXE9 311 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 GPR88Q9GZN0 384 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 ABCB6Q9NP58 842 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 ST7Q9NRC1 585 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 AFF4Q9UHB7 1163 aaKnown RBP13.72□□□□□ -0.21
PHGDH-218ENST00000641491 CNTN6Q9UQ52 1028 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 TRIP11Q15643 1979 aa13.72□□□□□ -0.21
PHGDH-218ENST00000641491 C2orf71A6NGG8 1288 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 HCRTO43612 131 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 ATP2C2O75185 946 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 MICAL2O94851 1124 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 NPR3P17342 541 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 BDNFP23560 247 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 CLCN1P35523 988 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 PRKCIP41743 596 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 ERVFC1P60507 584 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 MRPS5P82675 430 aaKnown RBP13.71□□□□□ -0.21
PHGDH-218ENST00000641491 CNGA2Q16280 664 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 MEA1Q16626 185 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 PPP1R26Q5T8A7 1209 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-218ENST00000641491 LCLAT1Q6UWP7 414 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 VSTM1Q6UX27 236 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 CCDC170Q8IYT3 715 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 SIX6OS1Q8N1H7 587 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 MICALL1Q8N3F8 863 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 TC2NQ8N9U0 490 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 ANKRD52Q8NB46 1076 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 WHAMMQ8TF30 809 aa13.71□□□□□ -0.21
PHGDH-218ENST00000641491 TRIM11Q96F44 468 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms