RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 SSR1P43307 286 aaKnown RBP17.35■□□□□ 0.37
PHGDH-216ENST00000641375 EPHB4P54760 987 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 LRRC38Q5VT99 294 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 ADAT2Q7Z6V5 191 aaKnown RBP17.35■□□□□ 0.37
PHGDH-216ENST00000641375 ADGRF2Q8IZF7 708 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 EIF1ADQ8N9N8 165 aaKnown RBP17.35■□□□□ 0.37
PHGDH-216ENST00000641375 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.35■□□□□ 0.37
PHGDH-216ENST00000641375 LPPQ93052 612 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 MCRS1Q96EZ8 462 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 RUNDC3BQ96NL0 473 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 SEZ6LQ9BYH1 1024 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 AMACRQ9UHK6 382 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 NR2E1Q9Y466 385 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 BRCA2P51587 3418 aa17.34■□□□□ 0.37
PHGDH-216ENST00000641375 KBTBD13C9JR72 458 aa17.34■□□□□ 0.37
PHGDH-216ENST00000641375 CAPN15O75808 1086 aa17.34■□□□□ 0.37
PHGDH-216ENST00000641375 MYBL2P10244 700 aa17.34■□□□□ 0.37
PHGDH-216ENST00000641375 RPL9P32969 192 aaKnown RBP17.34■□□□□ 0.37
PHGDH-216ENST00000641375 CETN2P41208 172 aa17.34■□□□□ 0.37
PHGDH-216ENST00000641375 ZNF252P-AS1Q0IIN9 211 aa17.34■□□□□ 0.37
PHGDH-216ENST00000641375 DHX34Q14147 1143 aaKnown RBP17.34■□□□□ 0.37
PHGDH-216ENST00000641375 PKDCCQ504Y2 493 aa17.34■□□□□ 0.37
PHGDH-216ENST00000641375 EXD1Q8NHP7 514 aa17.34■□□□□ 0.37
PHGDH-216ENST00000641375 AENQ8WTP8 325 aaKnown RBP17.34■□□□□ 0.37
PHGDH-216ENST00000641375 ADAM2Q99965 735 aa17.34■□□□□ 0.37
PHGDH-216ENST00000641375 HINFPQ9BQA5 517 aa17.34■□□□□ 0.37
PHGDH-216ENST00000641375 FAM53CQ9NYF3 392 aa17.34■□□□□ 0.37
PHGDH-216ENST00000641375 NME7Q9Y5B8 376 aa17.34■□□□□ 0.37
PHGDH-216ENST00000641375 FSCN2O14926 492 aa17.33■□□□□ 0.37
PHGDH-216ENST00000641375 MGEA5O60502 916 aa17.33■□□□□ 0.37
PHGDH-216ENST00000641375 SASH3O75995 380 aa17.33■□□□□ 0.37
PHGDH-216ENST00000641375 WARSP23381 471 aaKnown RBP17.33■□□□□ 0.37
PHGDH-216ENST00000641375 YY1P25490 414 aa17.33■□□□□ 0.37
PHGDH-216ENST00000641375 RFC1P35251 1148 aaPredicted RBP17.33■□□□□ 0.37
PHGDH-216ENST00000641375 TAS2R40P59535 323 aa17.33■□□□□ 0.37
PHGDH-216ENST00000641375 EMBQ6PCB8 327 aa17.33■□□□□ 0.37
PHGDH-216ENST00000641375 STK32AQ8WU08 396 aa17.33■□□□□ 0.37
PHGDH-216ENST00000641375 OSBPL7Q9BZF2 842 aa17.33■□□□□ 0.37
PHGDH-216ENST00000641375 RSAD1Q9HA92 442 aa17.33■□□□□ 0.37
PHGDH-216ENST00000641375 FAM49BQ9NUQ9 324 aa17.33■□□□□ 0.37
PHGDH-216ENST00000641375 TJP2Q9UDY2 1190 aa17.33■□□□□ 0.37
PHGDH-216ENST00000641375 TRIM17Q9Y577 477 aa17.33■□□□□ 0.37
PHGDH-216ENST00000641375 PTCH2Q9Y6C5 1203 aa17.33■□□□□ 0.37
PHGDH-216ENST00000641375 TDRD15B5MCY1 1934 aaKnown RBP17.33■□□□□ 0.37
PHGDH-216ENST00000641375 PFKMP08237 780 aa17.33■□□□□ 0.36
PHGDH-216ENST00000641375 PSMA2P25787 234 aa17.33■□□□□ 0.36
PHGDH-216ENST00000641375 OGDHQ02218 1023 aa17.33■□□□□ 0.36
PHGDH-216ENST00000641375 CUL1Q13616 776 aa17.33■□□□□ 0.36
PHGDH-216ENST00000641375 CASP8Q14790 479 aa17.33■□□□□ 0.36
PHGDH-216ENST00000641375 ACAP1Q15027 740 aa17.33■□□□□ 0.36
PHGDH-216ENST00000641375 CYP1B1Q16678 543 aa17.33■□□□□ 0.36
PHGDH-216ENST00000641375 DAB2IPQ5VWQ8 1189 aa17.33■□□□□ 0.36
PHGDH-216ENST00000641375 TRPV6Q9H1D0 765 aa17.33■□□□□ 0.36
PHGDH-216ENST00000641375 METTL5Q9NRN9 209 aaKnown RBP17.33■□□□□ 0.36
PHGDH-216ENST00000641375 PHF24Q9UPV7 400 aa17.33■□□□□ 0.36
PHGDH-216ENST00000641375 UTP11Q9Y3A2 253 aaKnown RBP17.33■□□□□ 0.36
PHGDH-216ENST00000641375 F8VP50 259 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 ARVCFO00192 962 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 CYB561D2O14569 222 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 PDGFRBP09619 1106 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 FGFR1P11362 822 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 SCNN1GP51170 649 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 HTRA3P83110 453 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 DR1Q01658 176 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 TTC30AQ86WT1 665 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 CCDC50Q8IVM0 306 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 PRELID2Q8N945 189 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 SLC35F5Q8WV83 523 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 RBM41Q96IZ5 413 aaKnown RBP17.32■□□□□ 0.36
PHGDH-216ENST00000641375 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.32■□□□□ 0.365e-8■■□□□ 14.4
PHGDH-216ENST00000641375 RAB17Q9H0T7 212 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 DPEP3Q9H4B8 488 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 PCYOX1Q9UHG3 505 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 E5RJQ4 531 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 PODXLO00592 558 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 LMO2P25791 158 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 TNNT3P45378 269 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-216ENST00000641375 CLCNKBP51801 687 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 BCAT1P54687 386 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 BST2Q10589 180 aaKnown RBP17.32■□□□□ 0.36
PHGDH-216ENST00000641375 FAM102AQ5T9C2 384 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-216ENST00000641375 POLNQ7Z5Q5 900 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 ZDHHC17Q8IUH5 632 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 GSPT2Q8IYD1 628 aaKnown RBP17.32■□□□□ 0.36
PHGDH-216ENST00000641375 RCOR2Q8IZ40 523 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 TMEM86AQ8N2M4 240 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 C12orf50Q8NA57 414 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-216ENST00000641375 ANKRD52Q8NB46 1076 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 IFT81Q8WYA0 676 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 MAGOHBQ96A72 148 aaKnown RBP17.32■□□□□ 0.36
PHGDH-216ENST00000641375 ACBD3Q9H3P7 528 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 VIPAS39Q9H9C1 493 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 MIOSQ9NXC5 875 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 DDX56Q9NY93 547 aaKnown RBP17.32■□□□□ 0.36
PHGDH-216ENST00000641375 RASAL2Q9UJF2 1139 aa17.32■□□□□ 0.36
PHGDH-216ENST00000641375 FAM187AA6NFU0 413 aa17.31■□□□□ 0.36
PHGDH-216ENST00000641375 ZSCAN5CA6NGD5 496 aaPredicted RBP17.31■□□□□ 0.36
PHGDH-216ENST00000641375 TTI1O43156 1089 aa17.31■□□□□ 0.36
PHGDH-216ENST00000641375 CARSP49589 748 aaKnown RBP17.31■□□□□ 0.36
PHGDH-216ENST00000641375 ODF2Q5BJF6 829 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms