RNA–Protein interactions for RNA: ENST00000640807.1

KCNMA1-289, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-289ENST00000640807 CLSTN3Q9BQT9 956 aa12.58□□□□□ -0.4
KCNMA1-289ENST00000640807 LMAN2LQ9H0V9 348 aa12.58□□□□□ -0.4
KCNMA1-289ENST00000640807 FNIP2Q9P278 1114 aa12.58□□□□□ -0.4
KCNMA1-289ENST00000640807 ADAMTS1Q9UHI8 967 aa12.58□□□□□ -0.4
KCNMA1-289ENST00000640807 TSPAN16Q9UKR8 245 aa12.58□□□□□ -0.4
KCNMA1-289ENST00000640807 NLRC5Q86WI3 1866 aa12.58□□□□□ -0.4
KCNMA1-289ENST00000640807 O00370 1275 aa12.58□□□□□ -0.4
KCNMA1-289ENST00000640807 TEX28O15482 410 aa12.58□□□□□ -0.4
KCNMA1-289ENST00000640807 DNAJB1P25685 340 aa12.58□□□□□ -0.4
KCNMA1-289ENST00000640807 ROR1Q01973 937 aa12.58□□□□□ -0.4
KCNMA1-289ENST00000640807 FAM171BQ6P995 826 aa12.58□□□□□ -0.4
KCNMA1-289ENST00000640807 LRRC8AQ8IWT6 810 aa12.58□□□□□ -0.4
KCNMA1-289ENST00000640807 HNRNPABQ99729 332 aaKnown RBP12.58□□□□□ -0.4
KCNMA1-289ENST00000640807 NHEJ1Q9H9Q4 299 aaPredicted RBP12.58□□□□□ -0.4
KCNMA1-289ENST00000640807 KIAA1671Q9BY89 1806 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 VWA8A3KMH1 1905 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 LAMA3Q16787 3333 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 MMEP08473 750 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 PLEKP08567 350 aaPredicted RBP12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 CNPP09543 421 aaKnown RBP12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 FAM200BP0CF97 657 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 CYLC1P35663 651 aaPredicted RBP12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 CDK17Q00537 523 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 ARHGAP17Q68EM7 881 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 LCLAT1Q6UWP7 414 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 ZNF571Q7Z3V5 609 aaPredicted RBP12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 PASD1Q8IV76 773 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 NOX5Q96PH1 765 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 ARHGAP20Q9P2F6 1191 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 NOCTQ9UK39 431 aaKnown RBP12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 IRAK3Q9Y616 596 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 SSU72P8A0A1W2PR75 194 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 CLDN5O00501 218 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 TBC1D4O60343 1298 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 BDNFP23560 247 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 CCDC142Q17RM4 750 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 HGSNATQ68CP4 663 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 RSPO2Q6UXX9 243 aaPredicted RBP12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 TRIM72Q6ZMU5 477 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 SCN4BQ8IWT1 228 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 FUKQ8N0W3 1084 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 ATAD1Q8NBU5 361 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 TMEM35BQ8NCS4 154 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 ZNF461Q8TAF7 563 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 SPPL2BQ8TCT7 592 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 B3GNT5Q9BYG0 378 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 RXFP1Q9HBX9 757 aa12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.57□□□□□ -0.4
KCNMA1-289ENST00000640807 ADAM12O43184 909 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 AP1G2O75843 785 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 TPGS2Q68CL5 300 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 FAM35AQ86V20 835 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 ANKRD52Q8NB46 1076 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 UBA3Q8TBC4 463 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 TRIM44Q96DX7 344 aaPredicted RBP12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 SMARCD1Q96GM5 515 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 FUBP3Q96I24 572 aaKnown RBP eCLIP12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 KRT82Q9NSB4 513 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 TMLHEQ9NVH6 421 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 C2orf71A6NGG8 1288 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 HIDE1A8MVS5 230 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 RFXAPO00287 272 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 MICAL2O94851 1124 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 ANXA13P27216 316 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 IRS1P35568 1242 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 BCAT1P54687 386 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 ADCY1Q08828 1119 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 RAB33AQ14088 237 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 SPA17Q15506 151 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 MGAT5BQ3V5L5 792 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 C2orf15Q8WU43 125 aaKnown RBP12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 ZNF518BQ9C0D4 1074 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 AFF4Q9UHB7 1163 aaKnown RBP12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 PRRG1O14668 218 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 GRIK1P39086 918 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 FMO1Q01740 532 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 RNF19BQ6ZMZ0 732 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 CCDC170Q8IYT3 715 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 MSANTD4Q8NCY6 345 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 DDX1Q92499 740 aaKnown RBP12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 KLHL5Q96PQ7 755 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 SEPT5Q99719 369 aaPredicted RBP12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 SYNCQ9H7C4 482 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 CYP4F11Q9HBI6 524 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 ST7Q9NRC1 585 aa12.56□□□□□ -0.4
KCNMA1-289ENST00000640807 WDR27A2RRH5 827 aa12.55□□□□□ -0.4
KCNMA1-289ENST00000640807 SPDYE4A6NLX3 237 aa12.55□□□□□ -0.4
KCNMA1-289ENST00000640807 LILRB3O75022 631 aa12.55□□□□□ -0.4
KCNMA1-289ENST00000640807 CYP2F1P24903 491 aa12.55□□□□□ -0.4
KCNMA1-289ENST00000640807 BST2Q10589 180 aaKnown RBP12.55□□□□□ -0.4
KCNMA1-289ENST00000640807 DUSP4Q13115 394 aa12.55□□□□□ -0.4
KCNMA1-289ENST00000640807 ZNF697Q5TEC3 545 aa12.55□□□□□ -0.4
KCNMA1-289ENST00000640807 ZSWIM1Q9BR11 485 aa12.55□□□□□ -0.4
KCNMA1-289ENST00000640807 DUSP16Q9BY84 665 aa12.55□□□□□ -0.4
KCNMA1-289ENST00000640807 TLE6Q9H808 572 aa12.55□□□□□ -0.4
KCNMA1-289ENST00000640807 LUC7LQ9NQ29 371 aaKnown RBP12.55□□□□□ -0.4
KCNMA1-289ENST00000640807 PCDHGC3Q9UN70 934 aa12.55□□□□□ -0.4
KCNMA1-289ENST00000640807 PCDHGC5Q9Y5F6 944 aa12.55□□□□□ -0.4
KCNMA1-289ENST00000640807 MYH10P35580 1976 aa12.55□□□□□ -0.4
KCNMA1-289ENST00000640807 TMEM265A0A087WTH1 108 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms