RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	SZT2	Q5T011	3432 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	TULP2	O00295	520 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	C2CD2L	O14523	706 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	ADAM12	O43184	909 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	RPL17	P18621	184 aa	Known RBP	18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	CDH5	P33151	784 aa	Predicted RBP	18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	PLCB3	Q01970	1234 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	SPA17	Q15506	151 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	ZNF280D	Q6N043	979 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	VPS52	Q8N1B4	723 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	AUTS2	Q8WXX7	1259 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	PIK3R5	Q8WYR1	880 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	HNRNPAB	Q99729	332 aa	Known RBP	18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	PBX4	Q9BYU1	374 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	ISCU	Q9H1K1	167 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	TRMT1	Q9NXH9	659 aa	Known RBP	18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	PCDHA11	Q9Y5I1	949 aa		18.82	■□□□□ 0.6
SPIN3-238	ENST00000640421	CARNS1	A5YM72	827 aa		18.81	■□□□□ 0.6
SPIN3-238	ENST00000640421	GZMA	P12544	262 aa		18.81	■□□□□ 0.6
SPIN3-238	ENST00000640421	BMP8B	P34820	402 aa		18.81	■□□□□ 0.6
SPIN3-238	ENST00000640421	GPD2	P43304	727 aa		18.81	■□□□□ 0.6
SPIN3-238	ENST00000640421	CACNA2D1	P54289	1103 aa		18.81	■□□□□ 0.6
SPIN3-238	ENST00000640421	DSG1	Q02413	1049 aa		18.81	■□□□□ 0.6
SPIN3-238	ENST00000640421	CENPC	Q03188	943 aa		18.81	■□□□□ 0.6
SPIN3-238	ENST00000640421	SLC39A12	Q504Y0	691 aa		18.81	■□□□□ 0.6
SPIN3-238	ENST00000640421	C2CD6	Q53TS8	623 aa		18.81	■□□□□ 0.6
SPIN3-238	ENST00000640421	ANKS3	Q6ZW76	656 aa		18.81	■□□□□ 0.6
SPIN3-238	ENST00000640421	ZNF518B	Q9C0D4	1074 aa		18.81	■□□□□ 0.6
SPIN3-238	ENST00000640421	LACRT	Q9GZZ8	138 aa		18.81	■□□□□ 0.6
SPIN3-238	ENST00000640421	LHX5	Q9H2C1	402 aa		18.81	■□□□□ 0.6
SPIN3-238	ENST00000640421	ALG13	Q9NP73	1137 aa	Known RBP	18.81	■□□□□ 0.6
SPIN3-238	ENST00000640421	MYH10	P35580	1976 aa		18.81	■□□□□ 0.6
SPIN3-238	ENST00000640421	BEST1	O76090	585 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	FTL	P02792	175 aa	Predicted RBP	18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	CCDC175	P0C221	793 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	MAGEA1	P43355	309 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	GLUD2	P49448	558 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	TSPY1	Q01534	308 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	STIL	Q15468	1287 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	PSMD5	Q16401	504 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	ACAD10	Q6JQN1	1059 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	TRIM72	Q6ZMU5	477 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	SECISBP2L	Q93073	1101 aa	Known RBP	18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	MTRR	Q9UBK8	725 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	TJP2	Q9UDY2	1190 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	TRIM10	Q9UDY6	481 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	REV3L	O60673	3130 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	RTN2	O75298	545 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	IPO7	O95373	1038 aa	Known RBP	18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	LSM8	O95777	96 aa	Known RBP	18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	DNAJB1	P25685	340 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	DNAJB2	P25686	324 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	KRT83	P78385	493 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	TAP1	Q03518	808 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	KIAA1841	Q6NSI8	718 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	FAM35A	Q86V20	835 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	ZSCAN30	Q86W11	494 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	REXO1L1P	Q8IX06	675 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	CCAR2	Q8N163	923 aa	Known RBP	18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	ANKRD52	Q8NB46	1076 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	TMEM35B	Q8NCS4	154 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	ZBP1	Q9H171	429 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	CDY1	Q9Y6F8	540 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	DUSP10	Q9Y6W6	482 aa		18.8	■□□□□ 0.6
SPIN3-238	ENST00000640421	OR6C75	A6NL08	312 aa		18.79	■□□□□ 0.6
SPIN3-238	ENST00000640421	VNN2	O95498	520 aa		18.79	■□□□□ 0.6
SPIN3-238	ENST00000640421	VAV2	P52735	878 aa		18.79	■□□□□ 0.6
SPIN3-238	ENST00000640421	GALC	P54803	685 aa		18.79	■□□□□ 0.6
SPIN3-238	ENST00000640421	KRT17	Q04695	432 aa		18.79	■□□□□ 0.6
SPIN3-238	ENST00000640421	PDE4C	Q08493	712 aa		18.79	■□□□□ 0.6
SPIN3-238	ENST00000640421	PTP4A2	Q12974	167 aa		18.79	■□□□□ 0.6
SPIN3-238	ENST00000640421	LLGL2	Q6P1M3	1020 aa		18.79	■□□□□ 0.6
SPIN3-238	ENST00000640421	MON1B	Q7L1V2	547 aa		18.79	■□□□□ 0.6
SPIN3-238	ENST00000640421	TDH	Q8IZJ6	230 aa		18.79	■□□□□ 0.6
SPIN3-238	ENST00000640421	FBXO22	Q8NEZ5	403 aa		18.79	■□□□□ 0.6
SPIN3-238	ENST00000640421	CLSTN3	Q9BQT9	956 aa		18.79	■□□□□ 0.6
SPIN3-238	ENST00000640421	MED10	Q9BTT4	135 aa		18.79	■□□□□ 0.6
SPIN3-238	ENST00000640421	DNAI2	Q9GZS0	605 aa		18.79	■□□□□ 0.6
SPIN3-238	ENST00000640421	PRO3102	Q9H379	93 aa		18.79	■□□□□ 0.6
SPIN3-238	ENST00000640421	KRT82	Q9NSB4	513 aa		18.79	■□□□□ 0.6
SPIN3-238	ENST00000640421	MYO7A	Q13402	2215 aa		18.79	■□□□□ 0.6
SPIN3-238	ENST00000640421	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	18.78	■□□□□ 0.6
SPIN3-238	ENST00000640421	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	18.78	■□□□□ 0.6
SPIN3-238	ENST00000640421	C5orf67	F2Z3F1	127 aa		18.78	■□□□□ 0.6
SPIN3-238	ENST00000640421		H7C4K7	107 aa		18.78	■□□□□ 0.6
SPIN3-238	ENST00000640421	ABCB4	P21439	1286 aa		18.78	■□□□□ 0.6
SPIN3-238	ENST00000640421	ARHGAP25	P42331	645 aa		18.78	■□□□□ 0.6
SPIN3-238	ENST00000640421	ARPP19	P56211	112 aa		18.78	■□□□□ 0.6
SPIN3-238	ENST00000640421	PTPN20	Q4JDL3	420 aa		18.78	■□□□□ 0.6
SPIN3-238	ENST00000640421	PMF1	Q6P1K2	205 aa		18.78	■□□□□ 0.6
SPIN3-238	ENST00000640421	CLEC20A	Q6ZU45	233 aa		18.78	■□□□□ 0.6
SPIN3-238	ENST00000640421	SLC35F5	Q8WV83	523 aa		18.78	■□□□□ 0.6
SPIN3-238	ENST00000640421	PGLYRP2	Q96PD5	576 aa		18.78	■□□□□ 0.6
SPIN3-238	ENST00000640421	CPXM1	Q96SM3	734 aa		18.78	■□□□□ 0.6
SPIN3-238	ENST00000640421	PLVAP	Q9BX97	442 aa		18.78	■□□□□ 0.6
SPIN3-238	ENST00000640421	THAP2	Q9H0W7	228 aa		18.78	■□□□□ 0.6
SPIN3-238	ENST00000640421	HESX1	Q9UBX0	185 aa		18.78	■□□□□ 0.6
SPIN3-238	ENST00000640421	CHORDC1	Q9UHD1	332 aa	Predicted RBP	18.78	■□□□□ 0.6
SPIN3-238	ENST00000640421	BACE2	Q9Y5Z0	518 aa		18.78	■□□□□ 0.6
SPIN3-238	ENST00000640421	ATMIN	O43313	823 aa	Predicted RBP	18.77	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms