RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 PTPRFP10586 1907 aa13.02□□□□□ -0.33
SPIN3-236ENST00000640131 TIMM44O43615 452 aa13.02□□□□□ -0.33
SPIN3-236ENST00000640131 TPBGLP0DKB5 382 aa13.02□□□□□ -0.33
SPIN3-236ENST00000640131 ANXA13P27216 316 aa13.02□□□□□ -0.33
SPIN3-236ENST00000640131 CTNNA1P35221 906 aaKnown RBP13.02□□□□□ -0.33
SPIN3-236ENST00000640131 VPS41P49754 854 aa13.02□□□□□ -0.33
SPIN3-236ENST00000640131 GPC3P51654 580 aa13.02□□□□□ -0.33
SPIN3-236ENST00000640131 ORC1Q13415 861 aa13.02□□□□□ -0.33
SPIN3-236ENST00000640131 BRDTQ58F21 947 aaPredicted RBP13.02□□□□□ -0.33
SPIN3-236ENST00000640131 TTC27Q6P3X3 843 aa13.02□□□□□ -0.33
SPIN3-236ENST00000640131 RHOT2Q8IXI1 618 aa13.02□□□□□ -0.33
SPIN3-236ENST00000640131 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.02□□□□□ -0.33
SPIN3-236ENST00000640131 RASGEF1CQ8N431 466 aa13.02□□□□□ -0.33
SPIN3-236ENST00000640131 STKLD1Q8NE28 680 aa13.02□□□□□ -0.33
SPIN3-236ENST00000640131 STK32AQ8WU08 396 aa13.02□□□□□ -0.33
SPIN3-236ENST00000640131 C1orf54Q8WWF1 131 aa13.02□□□□□ -0.33
SPIN3-236ENST00000640131 SREK1Q8WXA9 508 aaKnown RBP13.02□□□□□ -0.33
SPIN3-236ENST00000640131 ATG4AQ8WYN0 398 aa13.02□□□□□ -0.33
SPIN3-236ENST00000640131 MAGOHBQ96A72 148 aaKnown RBP13.02□□□□□ -0.33
SPIN3-236ENST00000640131 SENP7Q9BQF6 1050 aa13.02□□□□□ -0.33
SPIN3-236ENST00000640131 ZSWIM1Q9BR11 485 aa13.02□□□□□ -0.33
SPIN3-236ENST00000640131 NTPCRQ9BSD7 190 aaKnown RBP13.02□□□□□ -0.33
SPIN3-236ENST00000640131 ASCC2Q9H1I8 757 aaPredicted RBP13.02□□□□□ -0.33
SPIN3-236ENST00000640131 PDGFCQ9NRA1 345 aa13.02□□□□□ -0.33
SPIN3-236ENST00000640131 HEY1Q9Y5J3 304 aa13.02□□□□□ -0.33
SPIN3-236ENST00000640131 MAGEA13PA6NCF6 341 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 CLDN3O15551 220 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 VNN1O95497 513 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 CYP1A1P04798 512 aaPredicted RBP13.01□□□□□ -0.33
SPIN3-236ENST00000640131 PTDSS1P48651 473 aaKnown RBP13.01□□□□□ -0.33
SPIN3-236ENST00000640131 ADARP55265 1226 aaKnown RBP13.01□□□□□ -0.33
SPIN3-236ENST00000640131 XRRA1Q6P2D8 792 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 WDR75Q8IWA0 830 aaKnown RBP13.01□□□□□ -0.33
SPIN3-236ENST00000640131 THNSL1Q8IYQ7 743 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 DDX23Q9BUQ8 820 aaKnown RBP13.01□□□□□ -0.33
SPIN3-236ENST00000640131 HEMGNQ9BXL5 484 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 MIS12Q9H081 205 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 FBXO9Q9UK97 447 aaPredicted RBP13.01□□□□□ -0.33
SPIN3-236ENST00000640131 TRIM33Q9UPN9 1127 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 ZNF148Q9UQR1 794 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 UTP11Q9Y3A2 253 aaKnown RBP13.01□□□□□ -0.33
SPIN3-236ENST00000640131 WDR90Q96KV7 1748 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 NOP56O00567 594 aaKnown RBP13.01□□□□□ -0.33
SPIN3-236ENST00000640131 EXTL3O43909 919 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 RFX1P22670 979 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 EAPPQ56P03 285 aaPredicted RBP13.01□□□□□ -0.33
SPIN3-236ENST00000640131 WDR44Q5JSH3 913 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 ERMARDQ5T6L9 678 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 CCDC25Q86WR0 208 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 RHPN2Q8IUC4 686 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 RDM1Q8NG50 284 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 MDM1Q8TC05 714 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 DDX1Q92499 740 aaKnown RBP13.01□□□□□ -0.33
SPIN3-236ENST00000640131 FAM129AQ9BZQ8 928 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 PORCNQ9H237 461 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 RETREG1Q9H6L5 497 aa13.01□□□□□ -0.33
SPIN3-236ENST00000640131 NFASCO94856 1347 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 TJP3O95049 919 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 CYP2C8P10632 490 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 FAM182AQ5T1J6 154 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 ZFYVE27Q5T4F4 411 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 KLC3Q6P597 504 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 LRIG3Q6UXM1 1119 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 CYP4X1Q8N118 509 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 UBL4BQ8N7F7 174 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 RNF149Q8NC42 400 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 RBBP8NLQ8NC74 664 aaPredicted RBP13□□□□□ -0.33
SPIN3-236ENST00000640131 PSPC1Q8WXF1 523 aaKnown RBP13□□□□□ -0.33
SPIN3-236ENST00000640131 FBXL18Q96ME1 805 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 SMC6Q96SB8 1091 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 MTMR12Q9C0I1 747 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 HESX1Q9UBX0 185 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 TIMM22Q9Y584 194 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 MAFBQ9Y5Q3 323 aaPredicted RBP13□□□□□ -0.33
SPIN3-236ENST00000640131 LTBP3Q9NS15 1303 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 DCDC2CA8MYV0 355 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 DKC1O60832 514 aaKnown RBP eCLIP13□□□□□ -0.33
SPIN3-236ENST00000640131 PEX11AO75192 247 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 TPPPO94811 219 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 CST3P01034 146 aaPredicted RBP13□□□□□ -0.33
SPIN3-236ENST00000640131 MAPK4P31152 587 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 GEMIN4P57678 1058 aaKnown RBP13□□□□□ -0.33
SPIN3-236ENST00000640131 MAGOHP61326 146 aaKnown RBP13□□□□□ -0.33
SPIN3-236ENST00000640131 SEL1L2Q5TEA6 688 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 PRUNE1Q86TP1 453 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 TMCO5AQ8N6Q1 288 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 PDCD7Q8N8D1 485 aaKnown RBP13□□□□□ -0.33
SPIN3-236ENST00000640131 PRELID2Q8N945 189 aa13□□□□□ -0.33
SPIN3-236ENST00000640131 SERBP1Q8NC51 408 aaKnown RBP eCLIP13□□□□□ -0.33
SPIN3-236ENST00000640131 ACSF2Q96CM8 615 aaPredicted RBP13□□□□□ -0.33
SPIN3-236ENST00000640131 FHDC1Q9C0D6 1143 aaPredicted RBP13□□□□□ -0.33
SPIN3-236ENST00000640131 DHX33Q9H6R0 707 aaKnown RBP13□□□□□ -0.33
SPIN3-236ENST00000640131 CCDC188H7C350 402 aa12.99□□□□□ -0.33
SPIN3-236ENST00000640131 NVLO15381 856 aaKnown RBP12.99□□□□□ -0.33
SPIN3-236ENST00000640131 B4GALT5O43286 388 aa12.99□□□□□ -0.33
SPIN3-236ENST00000640131 GRIN3BO60391 1043 aa12.99□□□□□ -0.33
SPIN3-236ENST00000640131 SKIP12755 728 aa12.99□□□□□ -0.33
SPIN3-236ENST00000640131 CLCN3P51790 818 aa12.99□□□□□ -0.33
SPIN3-236ENST00000640131 CHADLQ6NUI6 762 aa12.99□□□□□ -0.33
SPIN3-236ENST00000640131 JAMLQ86YT9 394 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms