RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 SLC44A4Q53GD3 710 aa18.92■□□□□ 0.62
PTPN11-207ENST00000639857 ZNF667Q5HYK9 610 aa18.92■□□□□ 0.62
PTPN11-207ENST00000639857 ZNF658Q5TYW1 1059 aaPredicted RBP18.92■□□□□ 0.62
PTPN11-207ENST00000639857 VITQ6UXI7 678 aa18.92■□□□□ 0.62
PTPN11-207ENST00000639857 MFSD6LQ8IWD5 586 aa18.92■□□□□ 0.62
PTPN11-207ENST00000639857 CCDC105Q8IYK2 499 aa18.92■□□□□ 0.62
PTPN11-207ENST00000639857 MYCBPAPQ8TBZ2 947 aa18.92■□□□□ 0.62
PTPN11-207ENST00000639857 OSBPL6Q9BZF3 934 aa18.92■□□□□ 0.62
PTPN11-207ENST00000639857 CRTAC1Q9NQ79 661 aa18.92■□□□□ 0.62
PTPN11-207ENST00000639857 MAPK8IP1Q9UQF2 711 aa18.92■□□□□ 0.62
PTPN11-207ENST00000639857 KRT13P13646 458 aa18.91■□□□□ 0.62
PTPN11-207ENST00000639857 CYP2F1P24903 491 aa18.91■□□□□ 0.62
PTPN11-207ENST00000639857 LMO2P25791 158 aa18.91■□□□□ 0.62
PTPN11-207ENST00000639857 VAMP7P51809 220 aa18.91■□□□□ 0.62
PTPN11-207ENST00000639857 NLRP12P59046 1061 aa18.91■□□□□ 0.62
PTPN11-207ENST00000639857 FCHO2Q0JRZ9 810 aa18.91■□□□□ 0.62
PTPN11-207ENST00000639857 SGSM1Q2NKQ1 1148 aa18.91■□□□□ 0.62
PTPN11-207ENST00000639857 GPR158Q5T848 1215 aa18.91■□□□□ 0.62
PTPN11-207ENST00000639857 FAM186BQ8IYM0 893 aa18.91■□□□□ 0.62
PTPN11-207ENST00000639857 OR6B3Q8NGW1 331 aa18.91■□□□□ 0.62
PTPN11-207ENST00000639857 GIPC2Q8TF65 315 aa18.91■□□□□ 0.62
PTPN11-207ENST00000639857 SMARCE1Q969G3 411 aa18.91■□□□□ 0.62
PTPN11-207ENST00000639857 MYLPFQ96A32 169 aa18.91■□□□□ 0.62
PTPN11-207ENST00000639857 SPATA17Q96L03 361 aa18.91■□□□□ 0.62
PTPN11-207ENST00000639857 MRPL45Q9BRJ2 306 aaKnown RBP18.91■□□□□ 0.62
PTPN11-207ENST00000639857 BRD9Q9H8M2 597 aa18.91■□□□□ 0.62
PTPN11-207ENST00000639857 MAGEC2Q9UBF1 373 aaPredicted RBP18.91■□□□□ 0.62
PTPN11-207ENST00000639857 HELZP42694 1942 aaKnown RBP18.91■□□□□ 0.62
PTPN11-207ENST00000639857 PATJQ8NI35 1801 aa18.9■□□□□ 0.62
PTPN11-207ENST00000639857 KANSL1LA0AUZ9 987 aa18.9■□□□□ 0.62
PTPN11-207ENST00000639857 HEPACAM2A8MVW5 462 aa18.9■□□□□ 0.62
PTPN11-207ENST00000639857 STK25O00506 426 aa18.9■□□□□ 0.62
PTPN11-207ENST00000639857 HCRTO43612 131 aa18.9■□□□□ 0.62
PTPN11-207ENST00000639857 AKAP3O75969 853 aa18.9■□□□□ 0.62
PTPN11-207ENST00000639857 VNN1O95497 513 aa18.9■□□□□ 0.62
PTPN11-207ENST00000639857 PPP1R2P41236 205 aa18.9■□□□□ 0.62
PTPN11-207ENST00000639857 MLLT6P55198 1093 aaPredicted RBP18.9■□□□□ 0.62
PTPN11-207ENST00000639857 PSMC1P62191 440 aaKnown RBP18.9■□□□□ 0.62
PTPN11-207ENST00000639857 DLG4P78352 724 aa18.9■□□□□ 0.62
PTPN11-207ENST00000639857 ADAM9Q13443 819 aa18.9■□□□□ 0.62
PTPN11-207ENST00000639857 SV2AQ7L0J3 742 aa18.9■□□□□ 0.62
PTPN11-207ENST00000639857 ARID3BQ8IVW6 561 aaPredicted RBP18.9■□□□□ 0.62
PTPN11-207ENST00000639857 PJA1Q8NG27 643 aa18.9■□□□□ 0.62
PTPN11-207ENST00000639857 MSANTD3Q96H12 275 aa18.9■□□□□ 0.62
PTPN11-207ENST00000639857 PCED1BQ96HM7 432 aa18.9■□□□□ 0.62
PTPN11-207ENST00000639857 NELL2Q99435 816 aa18.9■□□□□ 0.62
PTPN11-207ENST00000639857 EHD2Q9NZN4 543 aa18.9■□□□□ 0.62
PTPN11-207ENST00000639857 NXF1Q9UBU9 619 aaKnown RBP18.9■□□□□ 0.62
PTPN11-207ENST00000639857 SIT1Q9Y3P8 196 aa18.9■□□□□ 0.62
PTPN11-207ENST00000639857 TRIM66O15016 1216 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 CHADO15335 359 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 PI15O43692 258 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 KINO60870 393 aaKnown RBP18.89■□□□□ 0.61
PTPN11-207ENST00000639857 ATP2C2O75185 946 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 ASS1P00966 412 aaKnown RBP18.89■□□□□ 0.61
PTPN11-207ENST00000639857 F11P03951 625 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 PDGFRBP09619 1106 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 GLULP15104 373 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 GTF2H1P32780 548 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 VIPR2P41587 438 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 MAGEA9P43362 315 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 GPR15P49685 360 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 GRM2Q14416 872 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 C1orf220Q5T0J3 134 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 STXBP5Q5T5C0 1151 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 C1orf228Q6PIY5 440 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 TMEM150AQ86TG1 271 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 MRPS31Q92665 395 aaKnown RBP18.89■□□□□ 0.61
PTPN11-207ENST00000639857 TNIP3Q96KP6 325 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 IMPG2Q9BZV3 1241 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 ELOVL4Q9GZR5 314 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 MRPS17Q9Y2R5 130 aaKnown RBP18.89■□□□□ 0.61
PTPN11-207ENST00000639857 PCDHA5Q9Y5H7 936 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 MYH10P35580 1976 aa18.89■□□□□ 0.61
PTPN11-207ENST00000639857 SLC38A8A6NNN8 435 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 A8MXQ7 604 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 DPYSL4O14531 572 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 ZNF263O14978 683 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 CETN3O15182 167 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 PTPN1P18031 435 aaKnown RBP18.88■□□□□ 0.61
PTPN11-207ENST00000639857 ANXA13P27216 316 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 GDI1P31150 447 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 PIK3CAP42336 1068 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 PRCPP42785 496 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 CYP4F8P98187 520 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 CYP27A1Q02318 531 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 LRRC63Q05C16 580 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 DDR2Q16832 855 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 CCDC142Q17RM4 750 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 YAF2Q8IY57 180 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 SMYD4Q8IYR2 804 aaPredicted RBP18.88■□□□□ 0.61
PTPN11-207ENST00000639857 DTWD2Q8NBA8 298 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 B3GALNT2Q8NCR0 500 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 TSG101Q99816 390 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 SMYD3Q9H7B4 428 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 KIF9Q9HAQ2 790 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 DLGAP2Q9P1A6 1054 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 NME7Q9Y5B8 376 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 NCANO14594 1321 aa18.88■□□□□ 0.61
PTPN11-207ENST00000639857 ARNTLO00327 626 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms