RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 NCOA4Q13772 614 aa7.45□□□□□ -1.22
NECAP1-213ENST00000638883 DNAL1Q4LDG9 190 aa7.45□□□□□ -1.22
NECAP1-213ENST00000638883 TMPRSS6Q8IU80 811 aa7.45□□□□□ -1.22
NECAP1-213ENST00000638883 MARCH10Q8NA82 808 aaPredicted RBP7.45□□□□□ -1.22
NECAP1-213ENST00000638883 MRPL46Q9H2W6 279 aaKnown RBP7.45□□□□□ -1.22
NECAP1-213ENST00000638883 SNX25Q9H3E2 840 aa7.45□□□□□ -1.22
NECAP1-213ENST00000638883 TRABDQ9H4I3 376 aa7.45□□□□□ -1.22
NECAP1-213ENST00000638883 MARCH7Q9H992 704 aa7.45□□□□□ -1.22
NECAP1-213ENST00000638883 CYP4F11Q9HBI6 524 aa7.45□□□□□ -1.22
NECAP1-213ENST00000638883 CNNM1Q9NRU3 951 aa7.45□□□□□ -1.22
NECAP1-213ENST00000638883 TAS2R1Q9NYW7 299 aa7.45□□□□□ -1.22
NECAP1-213ENST00000638883 BCAP29Q9UHQ4 241 aa7.45□□□□□ -1.22
NECAP1-213ENST00000638883 DAPK2Q9UIK4 370 aa7.45□□□□□ -1.22
NECAP1-213ENST00000638883 T-ENOLP0DO92 83 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 FOXN2P32314 431 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 GTF2H1P32780 548 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 IFNA8P32881 189 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 RAP1GDS1P52306 607 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 IST1P53990 364 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 PTENP60484 403 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 LRRC63Q05C16 580 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 VSTM1Q6UX27 236 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 RAPH1Q70E73 1250 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 TAS1R3Q7RTX0 852 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 CLVS1Q8IUQ0 354 aaPredicted RBP7.44□□□□□ -1.22
NECAP1-213ENST00000638883 ANKMY2Q8IV38 441 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 ERI1Q8IV48 349 aaKnown RBP7.44□□□□□ -1.22
NECAP1-213ENST00000638883 EME1Q96AY2 570 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 NACC2Q96BF6 587 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 C18orf8Q96DM3 657 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 CALML4Q96GE6 196 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 TYW1Q9NV66 732 aaKnown RBP7.44□□□□□ -1.22
NECAP1-213ENST00000638883 NAALADL1Q9UQQ1 740 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 VPS9D1Q9Y2B5 631 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 PFASO15067 1338 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 GOLGA8IPA6NC78 632 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 ADAMTS3O15072 1205 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 MCF2P10911 925 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 PABPC1P11940 636 aaKnown RBP7.44□□□□□ -1.22
NECAP1-213ENST00000638883 KRT5P13647 590 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 CRABP2P29373 138 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 HNRNPH3P31942 346 aaKnown RBP7.44□□□□□ -1.22
NECAP1-213ENST00000638883 RPL21P46778 160 aaKnown RBP7.44□□□□□ -1.22
NECAP1-213ENST00000638883 RARS2Q5T160 578 aaKnown RBP7.44□□□□□ -1.22
NECAP1-213ENST00000638883 DUPD1Q68J44 220 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 NEPROQ6NW34 567 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 SMIM5Q71RC9 77 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 DYMQ7RTS9 669 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 GSTA5Q7RTV2 222 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 RAVER1Q8IY67 606 aaKnown RBP7.44□□□□□ -1.22
NECAP1-213ENST00000638883 CENPSQ8N2Z9 138 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 GOLM1Q8NBJ4 401 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 PPP1R14CQ8TAE6 165 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 HELQQ8TDG4 1101 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 RBM15Q96T37 977 aaKnown RBP eCLIP7.44□□□□□ -1.22
NECAP1-213ENST00000638883 MIPEPQ99797 713 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 RNF38Q9H0F5 515 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 DDX43Q9NXZ2 648 aaKnown RBP7.44□□□□□ -1.22
NECAP1-213ENST00000638883 ANAPC5Q9UJX4 755 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 KIAA1024Q9UPX6 916 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 TNRC18O15417 2968 aaPredicted RBP7.44□□□□□ -1.22
NECAP1-213ENST00000638883 SYCE1LA8MT33 242 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 GSG1L2A8MUP6 293 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 I3L4J1 428 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 K7EPI3 171 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 VILLO15195 856 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 CCDC130P13994 396 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 GFAPP14136 432 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 CCT8P50990 548 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 KCNQ4P56696 695 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 TFAP4Q01664 338 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 DOK7Q18PE1 504 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 MYLK3Q32MK0 819 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 EARS2Q5JPH6 523 aaKnown RBP7.44□□□□□ -1.22
NECAP1-213ENST00000638883 SNRNP48Q6IEG0 339 aaKnown RBP7.44□□□□□ -1.22
NECAP1-213ENST00000638883 PRR23CQ6ZRP0 262 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 UTS2BQ765I0 119 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 NOP9Q86U38 636 aaKnown RBP7.44□□□□□ -1.22
NECAP1-213ENST00000638883 NUDCD3Q8IVD9 361 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 MAGEB6Q8N7X4 407 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 PPP4R1Q8TF05 950 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 CLPTM1LQ96KA5 538 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 C9orf72Q96LT7 481 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 PCDH12Q9NPG4 1184 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 TRMT112Q9UI30 125 aaKnown RBP7.44□□□□□ -1.22
NECAP1-213ENST00000638883 TMEM59LQ9UK28 342 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 SLC27A5Q9Y2P5 690 aa7.44□□□□□ -1.22
NECAP1-213ENST00000638883 C1orf232A0A0U1RR37 186 aa7.43□□□□□ -1.22
NECAP1-213ENST00000638883 KPNA4O00629 521 aaPredicted RBP7.43□□□□□ -1.22
NECAP1-213ENST00000638883 C2CD2LO14523 706 aa7.43□□□□□ -1.22
NECAP1-213ENST00000638883 KIAA0391O15091 583 aaKnown RBP7.43□□□□□ -1.22
NECAP1-213ENST00000638883 MAN1A2O60476 641 aa7.43□□□□□ -1.22
NECAP1-213ENST00000638883 EDF1O60869 148 aaKnown RBP7.43□□□□□ -1.22
NECAP1-213ENST00000638883 ADAM23O75077 832 aa7.43□□□□□ -1.22
NECAP1-213ENST00000638883 FYNP06241 537 aa7.43□□□□□ -1.22
NECAP1-213ENST00000638883 HSPA1AP0DMV8 641 aaKnown RBP7.43□□□□□ -1.22
NECAP1-213ENST00000638883 HSPA1BP0DMV9 641 aaKnown RBP7.43□□□□□ -1.22
NECAP1-213ENST00000638883 CPA3P15088 417 aa7.43□□□□□ -1.22
NECAP1-213ENST00000638883 HSPA6P17066 643 aa7.43□□□□□ -1.22
NECAP1-213ENST00000638883 FGFR2P21802 821 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms