RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 NIF3L1Q9GZT8 377 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 MYOZ2Q9NPC6 264 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 ZNF302Q9NR11 478 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 LNPEPQ9UIQ6 1025 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 STRIP2Q9ULQ0 834 aa21.13■□□□□ 0.97
SYNGAP1-227ENST00000638142 CST3P01034 146 aaPredicted RBP21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 TSHRP16473 764 aa21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 OTUD4Q01804 1114 aaKnown RBP21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 TAF1BQ53T94 588 aaPredicted RBP21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 CDCA2Q69YH5 1023 aaPredicted RBP21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 SMYD5Q6GMV2 418 aa21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 ACTL9Q8TC94 416 aa21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 VPS33BQ9H267 617 aa21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 TLE6Q9H808 572 aa21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 CISHQ9NSE2 258 aa21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 NKX1-2Q9UD57 310 aaPredicted RBP21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 SCAF8Q9UPN6 1271 aaKnown RBP21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 SKAP2O75563 359 aaPredicted RBP21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 CBX6O95503 412 aa21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 EDN1P05305 212 aa21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 KRT7P08729 469 aa21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 ADRA1DP25100 572 aa21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 PTPN4P29074 926 aa21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 SSTR1P30872 391 aa21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 RNASELQ05823 741 aaKnown RBP21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 MAPK6Q16659 721 aa21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 C3orf62Q6ZUJ4 267 aa21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 BBS12Q6ZW61 710 aa21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 NIM1KQ8IY84 436 aa21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 WDTC1Q8N5D0 677 aa21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 ENDOVQ8N8Q3 282 aaKnown RBP21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 MZB1Q8WU39 189 aa21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 VPS11Q9H270 941 aa21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 NPHS2Q9NP85 383 aa21.12■□□□□ 0.97
SYNGAP1-227ENST00000638142 EFTUD2Q15029 972 aaKnown RBP eCLIP21.11■□□□□ 0.972e-7■■■■□ 22.5
SYNGAP1-227ENST00000638142 TAF11Q15544 211 aa21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 FNBP1LQ5T0N5 605 aa21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 ANKRD22Q5VYY1 191 aa21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 RHPN2Q8IUC4 686 aa21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 LRRC42Q9Y546 428 aa21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 ATG7O95352 703 aa21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 TPBGLP0DKB5 382 aa21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 HARSP12081 509 aaKnown RBP21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 EPHB2P29323 1055 aa21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 SLC25A11Q02978 314 aaKnown RBP21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 MSS51Q4VC12 460 aa21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 SEZ6Q53EL9 994 aa21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 SCARA3Q6AZY7 606 aa21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 ZPBP2Q6X784 338 aa21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 CLNKQ7Z7G1 428 aa21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 ZNF276Q8N554 614 aa21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 TEX9Q8N6V9 391 aa21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 NAF1Q96HR8 494 aaKnown RBP21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 NIFKQ9BYG3 293 aaKnown RBP21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 ADAM33Q9BZ11 813 aa21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 SLC24A3Q9HC58 644 aa21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 ZNF214Q9UL59 606 aaPredicted RBP21.11■□□□□ 0.97
SYNGAP1-227ENST00000638142 PSMA2P25787 234 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 GDF10P55107 478 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 BACE1P56817 501 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 SATB1Q01826 763 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 HADHQ16836 314 aaKnown RBP21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 CYP4A22Q5TCH4 519 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 DHX37Q8IY37 1157 aaKnown RBP21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 BANPQ8N9N5 519 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 FBXO36Q8NEA4 188 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 TCP10LQ8TDR4 215 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 MICAL1Q8TDZ2 1067 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 RSAD2Q8WXG1 361 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 ADCY3O60266 1144 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 CST8O60676 142 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 POLR2BP30876 1174 aaKnown RBP21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 RPL22P35268 128 aaKnown RBP21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 RFC5P40937 340 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 MYL6P60660 151 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 DYNLT1P63172 113 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 GAD2Q05329 585 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 TAZQ16635 292 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 SGSM1Q2NKQ1 1148 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 THNSL1Q8IYQ7 743 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 ARMC2Q8NEN0 867 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 KCNV2Q8TDN2 545 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 FNIP1Q8TF40 1166 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 DCAKDQ8WVC6 231 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 NUDCD1Q96RS6 583 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 WDR83Q9BRX9 315 aaKnown RBP21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 MTMR12Q9C0I1 747 aa21.1■□□□□ 0.97
SYNGAP1-227ENST00000638142 A6NHS1 94 aa21.09■□□□□ 0.97
SYNGAP1-227ENST00000638142 GM2AP17900 193 aa21.09■□□□□ 0.97
SYNGAP1-227ENST00000638142 ABL2P42684 1182 aa21.09■□□□□ 0.97
SYNGAP1-227ENST00000638142 CCNHP51946 323 aaPredicted RBP21.09■□□□□ 0.97
SYNGAP1-227ENST00000638142 CTC1Q2NKJ3 1217 aa21.09■□□□□ 0.97
SYNGAP1-227ENST00000638142 ZNF394Q53GI3 561 aa21.09■□□□□ 0.97
SYNGAP1-227ENST00000638142 PLEKHG4Q58EX7 1191 aa21.09■□□□□ 0.97
SYNGAP1-227ENST00000638142 CIAPIN1Q6FI81 312 aa21.09■□□□□ 0.97
SYNGAP1-227ENST00000638142 EP400NLQ6ZTU2 488 aa21.09■□□□□ 0.97
SYNGAP1-227ENST00000638142 MTDHQ86UE4 582 aaKnown RBP21.09■□□□□ 0.97
SYNGAP1-227ENST00000638142 PALM2Q8IXS6 379 aa21.09■□□□□ 0.97
SYNGAP1-227ENST00000638142 PDIK1LQ8N165 341 aa21.09■□□□□ 0.97
SYNGAP1-227ENST00000638142 ZNF526Q8TF50 670 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms