RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 CRTAC1Q9NQ79 661 aa17.92■□□□□ 0.46
CACNA1A-259ENST00000638114 MAGEC2Q9UBF1 373 aaPredicted RBP17.92■□□□□ 0.46
CACNA1A-259ENST00000638114 TRAF3IP3Q9Y228 551 aa17.92■□□□□ 0.46
CACNA1A-259ENST00000638114 NUP210Q8TEM1 1887 aaPredicted RBP17.92■□□□□ 0.46
CACNA1A-259ENST00000638114 FAM170BA6NMN3 283 aa17.91■□□□□ 0.46
CACNA1A-259ENST00000638114 TACC1O75410 805 aa17.91■□□□□ 0.46
CACNA1A-259ENST00000638114 STAU1O95793 577 aaKnown RBP17.91■□□□□ 0.46
CACNA1A-259ENST00000638114 NLRP12P59046 1061 aa17.91■□□□□ 0.46
CACNA1A-259ENST00000638114 DLG4P78352 724 aa17.91■□□□□ 0.46
CACNA1A-259ENST00000638114 CLDN10P78369 228 aa17.91■□□□□ 0.46
CACNA1A-259ENST00000638114 CYP27A1Q02318 531 aa17.91■□□□□ 0.46
CACNA1A-259ENST00000638114 NCOA4Q13772 614 aa17.91■□□□□ 0.46
CACNA1A-259ENST00000638114 ZNF699Q32M78 642 aa17.91■□□□□ 0.46
CACNA1A-259ENST00000638114 ZNF852Q6ZMS4 543 aa17.91■□□□□ 0.46
CACNA1A-259ENST00000638114 FMR1NBQ8N0W7 255 aaPredicted RBP17.91■□□□□ 0.46
CACNA1A-259ENST00000638114 GUF1Q8N442 669 aaKnown RBP17.91■□□□□ 0.46
CACNA1A-259ENST00000638114 XYLT2Q9H1B5 865 aa17.91■□□□□ 0.46
CACNA1A-259ENST00000638114 LTB4R2Q9NPC1 389 aa17.91■□□□□ 0.46
CACNA1A-259ENST00000638114 DLGAP2Q9P1A6 1054 aa17.91■□□□□ 0.46
CACNA1A-259ENST00000638114 MTF2Q9Y483 593 aaPredicted RBP17.91■□□□□ 0.46
CACNA1A-259ENST00000638114 TICRRQ7Z2Z1 1910 aa17.91■□□□□ 0.46
CACNA1A-259ENST00000638114 SLC38A8A6NNN8 435 aa17.9■□□□□ 0.46
CACNA1A-259ENST00000638114 PRAMEF12O95522 483 aa17.9■□□□□ 0.46
CACNA1A-259ENST00000638114 F11P03951 625 aa17.9■□□□□ 0.46
CACNA1A-259ENST00000638114 C4BPAP04003 597 aaKnown RBP17.9■□□□□ 0.46
CACNA1A-259ENST00000638114 GLULP15104 373 aa17.9■□□□□ 0.46
CACNA1A-259ENST00000638114 NR2F2P24468 414 aa17.9■□□□□ 0.46
CACNA1A-259ENST00000638114 MAGEA11P43364 429 aa17.9■□□□□ 0.46
CACNA1A-259ENST00000638114 PNOCQ13519 176 aa17.9■□□□□ 0.46
CACNA1A-259ENST00000638114 MDH1BQ5I0G3 518 aa17.9■□□□□ 0.46
CACNA1A-259ENST00000638114 TMEM150AQ86TG1 271 aa17.9■□□□□ 0.46
CACNA1A-259ENST00000638114 TMC2Q8TDI7 906 aa17.9■□□□□ 0.46
CACNA1A-259ENST00000638114 MRPS31Q92665 395 aaKnown RBP17.9■□□□□ 0.46
CACNA1A-259ENST00000638114 SLC46A2Q9BY10 475 aa17.9■□□□□ 0.46
CACNA1A-259ENST00000638114 BCO2Q9BYV7 579 aa17.9■□□□□ 0.46
CACNA1A-259ENST00000638114 SMG9Q9H0W8 520 aaKnown RBP17.9■□□□□ 0.46
CACNA1A-259ENST00000638114 TRPV5Q9NQA5 729 aa17.9■□□□□ 0.46
CACNA1A-259ENST00000638114 UXTQ9UBK9 157 aaPredicted RBP17.9■□□□□ 0.46
CACNA1A-259ENST00000638114 MRPS17Q9Y2R5 130 aaKnown RBP17.9■□□□□ 0.46
CACNA1A-259ENST00000638114 NME7Q9Y5B8 376 aa17.9■□□□□ 0.46
CACNA1A-259ENST00000638114 A8MXQ7 604 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 CHADO15335 359 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 NOL4O94818 638 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 FAM163BP0C2L3 166 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 BDNFP23560 247 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 TARSP26639 723 aaKnown RBP17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 FCHO2Q0JRZ9 810 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 ZNF667Q5HYK9 610 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 VSTM1Q6UX27 236 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 SCARA5Q6ZMJ2 495 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 SMYD4Q8IYR2 804 aaPredicted RBP17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 MAB21L3Q8N8X9 362 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 MYCBPAPQ8TBZ2 947 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 CSGALNACT1Q8TDX6 532 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 ELMO3Q96BJ8 720 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 TRMT2BQ96GJ1 504 aaKnown RBP17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 PCED1BQ96HM7 432 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 OSBPL6Q9BZF3 934 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 SMYD3Q9H7B4 428 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 VRTNQ9H8Y1 702 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 OBP2AQ9NY56 170 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 ZMYM5Q9UJ78 669 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 PIAS3Q9Y6X2 628 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 DENND4CQ5VZ89 1909 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 COL4A2P08572 1712 aa17.89■□□□□ 0.45
CACNA1A-259ENST00000638114 OBSL1O75147 1896 aa17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 MAN2B1O00754 1011 aa17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 VNN1O95497 513 aa17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 PTPN1P18031 435 aaKnown RBP17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 DDX6P26196 483 aaKnown RBP eCLIP17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 RPL13P26373 211 aaKnown RBP17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 ANXA13P27216 316 aa17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 WEE1P30291 646 aa17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 AVPR1AP37288 418 aa17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 GRIK1P39086 918 aa17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 RAP1GAPP47736 663 aa17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 VAMP7P51809 220 aa17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 NFIL3Q16649 462 aa17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 ZACNQ401N2 412 aa17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 TXNDC8Q6A555 127 aa17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 CMTM8Q8IZV2 173 aa17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 BPIFB1Q8TDL5 484 aa17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 LRRC3BQ96PB8 259 aa17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 NELL2Q99435 816 aa17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 DPEP3Q9H4B8 488 aa17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 RMND1Q9NWS8 449 aa17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 NDRG2Q9UN36 371 aaKnown RBP17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 F5P12259 2224 aa17.88■□□□□ 0.45
CACNA1A-259ENST00000638114 SHISA7A6NL88 538 aa17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 ARNTLO00327 626 aa17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 MAPK13O15264 365 aa17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 NCAM2O15394 837 aa17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 TADA3O75528 432 aa17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 AKAP3O75969 853 aa17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 KRT13P13646 458 aa17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 PIK3CAP42336 1068 aa17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 CDH8P55286 799 aa17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 FAM160A1Q05DH4 1040 aa17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 ADAM9Q13443 819 aa17.87■□□□□ 0.45
CACNA1A-259ENST00000638114 ARHGAP29Q52LW3 1261 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms