RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 WDTC1Q8N5D0 677 aa10.19□□□□□ -0.78
CACNA1A-248ENST00000637774 ARFGAP2Q8N6H7 521 aa10.19□□□□□ -0.78
CACNA1A-248ENST00000637774 EPS8L3Q8TE67 593 aaKnown RBP10.19□□□□□ -0.78
CACNA1A-248ENST00000637774 TMEM40Q8WWA1 233 aa10.19□□□□□ -0.78
CACNA1A-248ENST00000637774 RXFP2Q8WXD0 754 aa10.19□□□□□ -0.78
CACNA1A-248ENST00000637774 ZIC5Q96T25 663 aa10.19□□□□□ -0.78
CACNA1A-248ENST00000637774 DCLK3Q9C098 648 aa10.19□□□□□ -0.78
CACNA1A-248ENST00000637774 SAYSD1Q9NPB0 183 aa10.19□□□□□ -0.78
CACNA1A-248ENST00000637774 DOCK3Q8IZD9 2030 aa10.19□□□□□ -0.78
CACNA1A-248ENST00000637774 KIF13BQ9NQT8 1826 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 ABLIM1O14639 778 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 FAM189A1O60320 539 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 RPS6KA5O75582 802 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 IRAK1P51617 712 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 RABGGTBP53611 331 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 FKBP1BP68106 108 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 CRHR2Q13324 411 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 SMAD1Q15797 465 aaKnown RBP10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 MARCH8Q5T0T0 291 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 NETO2Q8NC67 525 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 CD101Q93033 1021 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 CFAP57Q96MR6 1250 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 ARHGAP39Q9C0H5 1083 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 CYTH4Q9UIA0 394 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 MANSC4A6NHS7 340 aaPredicted RBP10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 CD48P09326 243 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 GNL1P36915 607 aaPredicted RBP10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 HADHBP55084 474 aaKnown RBP10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 UBAP2Q5T6F2 1119 aaKnown RBP10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 BSPRYQ5W0U4 402 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 MAMDC4Q6UXC1 1216 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 CPLX4Q7Z7G2 160 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 RCOR2Q8IZ40 523 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 C3orf20Q8ND61 904 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 ACTL9Q8TC94 416 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 TMEM174Q8WUU8 243 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 NDRG1Q92597 394 aaKnown RBP10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 SNF8Q96H20 258 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 VCPIP1Q96JH7 1222 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 FOXO6A8MYZ6 492 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 EBAG9O00559 213 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 FSCN2O14926 492 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 PSTPIP1O43586 416 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 CILPO75339 1184 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 MTA2O94776 668 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 LSM8O95777 96 aaKnown RBP10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 VDRP11473 427 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 DARSP14868 501 aaKnown RBP10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 SDC4P31431 198 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 CHKAP35790 457 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 FNTAP49354 379 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 FLT3LGP49771 235 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 NRLP54845 237 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 SLC8A3P57103 927 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 MMRN1Q13201 1228 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 SNX17Q15036 470 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 LRRC14Q15048 493 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 CCDC142Q17RM4 750 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 DARS2Q6PI48 645 aaKnown RBP10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 SPOCD1Q6ZMY3 1216 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 ZNF410Q86VK4 478 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 ANKMY2Q8IV38 441 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 DPEP3Q9H4B8 488 aa10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 MRPL42Q9Y6G3 142 aaKnown RBP10.18□□□□□ -0.78
CACNA1A-248ENST00000637774 CASTOR2A6NHX0 329 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 HMGB1P1B2RPK0 211 aaPredicted RBP10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 I3L4J1 428 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 CAPN9O14815 690 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 VIMP08670 466 aaKnown RBP10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 GNAT1P11488 350 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 ELNP15502 786 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 PROZP22891 400 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 TNFRSF8P28908 595 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 ECHS1P30084 290 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 MIPP30301 263 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 THPOP40225 353 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 PTGIRP43119 386 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 OTUD4Q01804 1114 aaKnown RBP10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 FBXO47Q5MNV8 452 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 ZNF618Q5T7W0 954 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 DSTYKQ6XUX3 929 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 ANKS1BQ7Z6G8 1248 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 C10orf67Q8IYJ2 551 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 APPL2Q8NEU8 664 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 EXD1Q8NHP7 514 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 PIWIL1Q96J94 861 aaKnown RBP10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 GAD1Q99259 594 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 PABPC3Q9H361 631 aaKnown RBP10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 DHX35Q9H5Z1 703 aaKnown RBP10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 ASNSD1Q9NWL6 643 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 ITGA11Q9UKX5 1188 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 USP18Q9UMW8 372 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 MYADML2A6NDP7 307 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 KRT7P08729 469 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 GHRP10912 638 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 LMO2P25791 158 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 PSEN1P49768 467 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 SLMAPQ14BN4 828 aa10.17□□□□□ -0.78
CACNA1A-248ENST00000637774 DCAF4L1Q3SXM0 396 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms