RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 FTCDO95954 541 aa16.23■□□□□ 0.19
CLN6-219ENST00000637329 RAG1P15918 1043 aa16.23■□□□□ 0.19
CLN6-219ENST00000637329 PTPN20Q4JDL3 420 aa16.23■□□□□ 0.19
CLN6-219ENST00000637329 DNAJC24Q6P3W2 148 aa16.23■□□□□ 0.19
CLN6-219ENST00000637329 CD300LGQ6UXG3 332 aa16.23■□□□□ 0.19
CLN6-219ENST00000637329 PEX26Q7Z412 305 aa16.23■□□□□ 0.19
CLN6-219ENST00000637329 NT5DC3Q86UY8 548 aa16.23■□□□□ 0.19
CLN6-219ENST00000637329 TTC30AQ86WT1 665 aa16.23■□□□□ 0.19
CLN6-219ENST00000637329 ZNF280BQ86YH2 543 aa16.23■□□□□ 0.19
CLN6-219ENST00000637329 ANKRD52Q8NB46 1076 aa16.23■□□□□ 0.19
CLN6-219ENST00000637329 MYRIPQ8NFW9 859 aa16.23■□□□□ 0.19
CLN6-219ENST00000637329 HNRNPABQ99729 332 aaKnown RBP16.23■□□□□ 0.19
CLN6-219ENST00000637329 GDF15Q99988 308 aa16.23■□□□□ 0.19
CLN6-219ENST00000637329 SYT15Q9BQS2 421 aa16.23■□□□□ 0.19
CLN6-219ENST00000637329 PRDM5Q9NQX1 630 aaPredicted RBP16.23■□□□□ 0.19
CLN6-219ENST00000637329 FAM49BQ9NUQ9 324 aa16.23■□□□□ 0.19
CLN6-219ENST00000637329 CYTH4Q9UIA0 394 aa16.23■□□□□ 0.19
CLN6-219ENST00000637329 ANAPC7Q9UJX3 599 aa16.23■□□□□ 0.19
CLN6-219ENST00000637329 AMFRQ9UKV5 643 aa16.23■□□□□ 0.19
CLN6-219ENST00000637329 COL4A6Q14031 1691 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 TCRBV5S1A1TA0A578 114 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 TRIM43BA6NCK2 446 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 SYN3O14994 580 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 B4GALT3O60512 393 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 SLU7O95391 586 aaKnown RBP16.22■□□□□ 0.19
CLN6-219ENST00000637329 AMHP03971 560 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 PTPN1P18031 435 aaKnown RBP16.22■□□□□ 0.19
CLN6-219ENST00000637329 LMO2P25791 158 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 SSTR3P32745 418 aaPredicted RBP16.22■□□□□ 0.19
CLN6-219ENST00000637329 MAN1A1P33908 653 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 GTF2F1P35269 517 aaKnown RBP eCLIP16.22■□□□□ 0.192e-6■■■□□ 14.6
CLN6-219ENST00000637329 SLC1A1P43005 524 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 OR1G1P47890 313 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 SLC8A3P57103 927 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 PLCB3Q01970 1234 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 CKAP4Q07065 602 aaKnown RBP16.22■□□□□ 0.19
CLN6-219ENST00000637329 MAMLD1Q13495 774 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 ZNF268Q14587 947 aaPredicted RBP16.22■□□□□ 0.19
CLN6-219ENST00000637329 ZDHHC17Q8IUH5 632 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 TDHQ8IZJ6 230 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 CEP112Q8N8E3 955 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 C12orf29Q8N999 325 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 TRIM43Q96BQ3 446 aaPredicted RBP16.22■□□□□ 0.19
CLN6-219ENST00000637329 C18orf8Q96DM3 657 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 VWCEQ96DN2 955 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 HES6Q96HZ4 224 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 CPXM1Q96SM3 734 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 ACBD6Q9BR61 282 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 SYNCQ9H7C4 482 aa16.22■□□□□ 0.19
CLN6-219ENST00000637329 TET1Q8NFU7 2136 aa16.21■□□□□ 0.19
CLN6-219ENST00000637329 FNDC1Q4ZHG4 1894 aaPredicted RBP16.21■□□□□ 0.19
CLN6-219ENST00000637329 PDGFRBP09619 1106 aa16.21■□□□□ 0.19
CLN6-219ENST00000637329 SCNN1AP37088 669 aa16.21■□□□□ 0.19
CLN6-219ENST00000637329 BRCC3P46736 316 aa16.21■□□□□ 0.19
CLN6-219ENST00000637329 RPL34P49207 117 aaKnown RBP16.21■□□□□ 0.19
CLN6-219ENST00000637329 ELAVL2Q12926 359 aaKnown RBP16.21■□□□□ 0.19
CLN6-219ENST00000637329 RPS6KA1Q15418 735 aa16.21■□□□□ 0.19
CLN6-219ENST00000637329 MAPRE1Q15691 268 aaKnown RBP16.21■□□□□ 0.19
CLN6-219ENST00000637329 PPP1R15BQ5SWA1 713 aa16.21■□□□□ 0.19
CLN6-219ENST00000637329 OVOS1Q6IE37 1185 aa16.21■□□□□ 0.19
CLN6-219ENST00000637329 XYLT1Q86Y38 959 aa16.21■□□□□ 0.19
CLN6-219ENST00000637329 THEM5Q8N1Q8 247 aa16.21■□□□□ 0.19
CLN6-219ENST00000637329 RPGRIP1Q96KN7 1286 aa16.21■□□□□ 0.19
CLN6-219ENST00000637329 OSBPL9Q96SU4 736 aa16.21■□□□□ 0.19
CLN6-219ENST00000637329 COLEC11Q9BWP8 271 aa16.21■□□□□ 0.19
CLN6-219ENST00000637329 NRDE2Q9H7Z3 1164 aa16.21■□□□□ 0.19
CLN6-219ENST00000637329 RNF14Q9UBS8 474 aa16.21■□□□□ 0.19
CLN6-219ENST00000637329 ADAM28Q9UKQ2 775 aa16.21■□□□□ 0.19
CLN6-219ENST00000637329 SF3B1O75533 1304 aaKnown RBP eCLIP16.2■□□□□ 0.186e-9■■■■■ 118.2
CLN6-219ENST00000637329 TBKBP1A7MCY6 615 aa16.2■□□□□ 0.18
CLN6-219ENST00000637329 MYO1FO00160 1098 aa16.2■□□□□ 0.18
CLN6-219ENST00000637329 XPO1O14980 1071 aaKnown RBP16.2■□□□□ 0.18
CLN6-219ENST00000637329 HCRTO43612 131 aa16.2■□□□□ 0.18
CLN6-219ENST00000637329 DGKIO75912 1065 aa16.2■□□□□ 0.18
CLN6-219ENST00000637329 CCDC130P13994 396 aa16.2■□□□□ 0.18
CLN6-219ENST00000637329 CSF2RAP15509 400 aa16.2■□□□□ 0.18
CLN6-219ENST00000637329 IGFBP6P24592 240 aaPredicted RBP16.2■□□□□ 0.18
CLN6-219ENST00000637329 ACADSBP45954 432 aa16.2■□□□□ 0.18
CLN6-219ENST00000637329 PLA2G4AP47712 749 aa16.2■□□□□ 0.18
CLN6-219ENST00000637329 PSMC1P62191 440 aaKnown RBP16.2■□□□□ 0.18
CLN6-219ENST00000637329 YWHAHQ04917 246 aaPredicted RBP16.2■□□□□ 0.18
CLN6-219ENST00000637329 PAN2Q504Q3 1202 aaKnown RBP16.2■□□□□ 0.18
CLN6-219ENST00000637329 INTS6LQ5JSJ4 861 aaKnown RBP16.2■□□□□ 0.18
CLN6-219ENST00000637329 MNS1Q8NEH6 495 aa16.2■□□□□ 0.18
CLN6-219ENST00000637329 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.2■□□□□ 0.18
CLN6-219ENST00000637329 FEZF2Q8TBJ5 459 aa16.2■□□□□ 0.18
CLN6-219ENST00000637329 MYCBPAPQ8TBZ2 947 aa16.2■□□□□ 0.18
CLN6-219ENST00000637329 SLC2A14Q8TDB8 520 aa16.2■□□□□ 0.18
CLN6-219ENST00000637329 FNIP1Q8TF40 1166 aa16.2■□□□□ 0.18
CLN6-219ENST00000637329 HASPINQ8TF76 798 aa16.2■□□□□ 0.18
CLN6-219ENST00000637329 SLC35F5Q8WV83 523 aa16.2■□□□□ 0.18
CLN6-219ENST00000637329 MCRS1Q96EZ8 462 aa16.2■□□□□ 0.18
CLN6-219ENST00000637329 SELENOOQ9BVL4 669 aa16.2■□□□□ 0.18
CLN6-219ENST00000637329 SLC4A5Q9BY07 1137 aa16.2■□□□□ 0.18
CLN6-219ENST00000637329 IL23AQ9NPF7 189 aa16.2■□□□□ 0.18
CLN6-219ENST00000637329 DNAJB4Q9UDY4 337 aa16.2■□□□□ 0.18
CLN6-219ENST00000637329 CCDC66A2RUB6 948 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 TMEM191CA6NGB0 347 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 NRP1O14786 923 aa16.19■□□□□ 0.18
CLN6-219ENST00000637329 NCK2O43639 380 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms