RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 MTHFD1LQ6UB35 978 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 CENPUQ71F23 418 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 TAX1BP1Q86VP1 789 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 XYLT1Q86Y38 959 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 CCDC197Q8NCU1 140 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 NLRP7Q8WX94 980 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 NCAPGQ9BPX3 1015 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 KLHL11Q9NVR0 708 aa12.76□□□□□ -0.37
CLN8-212ENST00000637083 BARX2Q9UMQ3 279 aaPredicted RBP12.76□□□□□ -0.37
CLN8-212ENST00000637083 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.76□□□□□ -0.37
CLN8-212ENST00000637083 H0YHG0 523 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 SGK1O00141 431 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 LRCH4O75427 683 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 MICAL2O94851 1124 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 KDELR1P24390 212 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 ADORA2AP29274 412 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 RAP1GAPP47736 663 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 LIG3P49916 1009 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 SLC25A11Q02978 314 aaKnown RBP12.75□□□□□ -0.37
CLN8-212ENST00000637083 GPS1Q13098 491 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 ITIH4Q14624 930 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 DCAF4L1Q3SXM0 396 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 ARHGEF18Q6ZSZ5 1173 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 BBS12Q6ZW61 710 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 ANKS1BQ7Z6G8 1248 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 TMEM192Q8IY95 271 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 SLC35B2Q8TB61 432 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 ZBTB10Q96DT7 871 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 MCRS1Q96EZ8 462 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 HEXIM2Q96MH2 286 aaKnown RBP12.75□□□□□ -0.37
CLN8-212ENST00000637083 ZNF317Q96PQ6 595 aaPredicted RBP12.75□□□□□ -0.37
CLN8-212ENST00000637083 DNAI2Q9GZS0 605 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 UBN1Q9NPG3 1134 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 METTL5Q9NRN9 209 aaKnown RBP12.75□□□□□ -0.37
CLN8-212ENST00000637083 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.75□□□□□ -0.37
CLN8-212ENST00000637083 AGAP1Q9UPQ3 857 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 DERAQ9Y315 318 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 ZSWIM8A7E2V4 1837 aa12.75□□□□□ -0.37
CLN8-212ENST00000637083 RRN3P2A6NIE6 340 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 H3BRB1 525 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 M0QYV0 167 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 IQCF3P0C7M6 154 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 TCF4P15884 667 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 ARF4P18085 180 aaPredicted RBP12.74□□□□□ -0.37
CLN8-212ENST00000637083 PCK1P35558 622 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 GTF2A2P52657 109 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 CDH8P55286 799 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 INCA1Q0VD86 236 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 MKRN3Q13064 507 aaKnown RBP12.74□□□□□ -0.37
CLN8-212ENST00000637083 PCBP1Q15365 356 aaKnown RBP eCLIP12.74□□□□□ -0.37
CLN8-212ENST00000637083 SLC10A6Q3KNW5 377 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 MAMDC4Q6UXC1 1216 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 PPP1R21Q6ZMI0 780 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 AFG1LQ8WV93 481 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 PRMT1Q99873 361 aaKnown RBP12.74□□□□□ -0.37
CLN8-212ENST00000637083 FAM118BQ9BPY3 351 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 ELOVL4Q9GZR5 314 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 TUT1Q9H6E5 874 aaKnown RBP12.74□□□□□ -0.37
CLN8-212ENST00000637083 ZWILCHQ9H900 591 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 RSAD1Q9HA92 442 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 PLEKHA5Q9HAU0 1116 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 SAYSD1Q9NPB0 183 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 DPP3Q9NY33 737 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 NKIRAS1Q9NYS0 192 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 A0A1B0GUA9 196 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 VIMP08670 466 aaKnown RBP12.74□□□□□ -0.37
CLN8-212ENST00000637083 GRM5P41594 1212 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 GPD2P43304 727 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 TAZQ16635 292 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 QPCTQ16769 361 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 DPP9Q86TI2 863 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 TDRPQ86YL5 185 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 KCTD6Q8NC69 237 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 CXorf38Q8TB03 319 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 RSAD2Q8WXG1 361 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 CPB2Q96IY4 423 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 CPXM1Q96SM3 734 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 C16orf70Q9BSU1 422 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 NT5C1AQ9BXI3 368 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 MAK16Q9BXY0 300 aaKnown RBP12.74□□□□□ -0.37
CLN8-212ENST00000637083 SDCBP2Q9H190 292 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 SMYD3Q9H7B4 428 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 KCNK9Q9NPC2 374 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 DNAJC17Q9NVM6 304 aaKnown RBP12.74□□□□□ -0.37
CLN8-212ENST00000637083 SENP1Q9P0U3 644 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 MORF4L1Q9UBU8 362 aa12.74□□□□□ -0.37
CLN8-212ENST00000637083 EXOC1LA0A1B0GW35 172 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 TMEM120BA0PK00 339 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 IQCA1LA6NCM1 817 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 GLTPD2A6NH11 291 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 C3orf70A6NLC5 250 aaPredicted RBP12.73□□□□□ -0.37
CLN8-212ENST00000637083 PDHXO00330 501 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 TSPAN1O60635 241 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 CST8O60676 142 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 ERBB2P04626 1255 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 SETSIPP0DME0 302 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 GHRP10912 638 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 BRAFP15056 766 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 PHBP35232 272 aa12.73□□□□□ -0.37
CLN8-212ENST00000637083 TFDP2Q14188 446 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms