RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 HSD17B7P56937 341 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 CTXN1P60606 82 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 DUSP2Q05923 314 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 COX10Q12887 443 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 NOGQ13253 232 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 G3BP1Q13283 466 aaKnown RBP eCLIP3.32□□□□□ -1.88
PSPC1-208ENST00000635562 CRHR2Q13324 411 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 PPP2R5CQ13362 524 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 MRPL49Q13405 166 aaKnown RBP3.32□□□□□ -1.88
PSPC1-208ENST00000635562 RIN1Q13671 783 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 SLMAPQ14BN4 828 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 PDCD2Q16342 344 aaPredicted RBP3.32□□□□□ -1.88
PSPC1-208ENST00000635562 ANO6Q4KMQ2 910 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 KHDC1Q4VXA5 237 aaKnown RBP3.32□□□□□ -1.88
PSPC1-208ENST00000635562 FAM47AQ5JRC9 791 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 MFSD14BQ5SR56 506 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 HECTD3Q5T447 861 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 THEMIS2Q5TEJ8 643 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 FAAH2Q6GMR7 532 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 OTUD7BQ6GQQ9 843 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 ISM2Q6H9L7 571 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 C4orf50Q6ZRC1 276 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 SDCCAG8Q86SQ7 713 aaPredicted RBP3.32□□□□□ -1.88
PSPC1-208ENST00000635562 GPR135Q8IZ08 494 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 D2HGDHQ8N465 521 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 DCBLD1Q8N8Z6 715 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 C3orf20Q8ND61 904 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 KLHDC4Q8TBB5 520 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 LARP4BQ92615 738 aaKnown RBP3.32□□□□□ -1.88
PSPC1-208ENST00000635562 RAB24Q969Q5 203 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 CLPTM1LQ96KA5 538 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 RPL10LQ96L21 214 aaKnown RBP3.32□□□□□ -1.88
PSPC1-208ENST00000635562 AGAP3Q96P47 875 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 MYD88Q99836 296 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 LSM14BQ9BX40 385 aaKnown RBP3.32□□□□□ -1.88
PSPC1-208ENST00000635562 LMAN2LQ9H0V9 348 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 ELAC1Q9H777 363 aaKnown RBP3.32□□□□□ -1.88
PSPC1-208ENST00000635562 HELLSQ9NRZ9 838 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 RABL2AQ9UBK7 228 aaPredicted RBP3.32□□□□□ -1.88
PSPC1-208ENST00000635562 HERC5Q9UII4 1024 aaKnown RBP3.32□□□□□ -1.88
PSPC1-208ENST00000635562 POLHQ9Y253 713 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 REXO2Q9Y3B8 237 aaKnown RBP3.32□□□□□ -1.88
PSPC1-208ENST00000635562 ATP6V0A2Q9Y487 856 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 NR2E3Q9Y5X4 410 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 MYBBP1AQ9BQG0 1328 aaKnown RBP3.32□□□□□ -1.88
PSPC1-208ENST00000635562 ZMYM3Q14202 1370 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 PIK3R4Q99570 1358 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 ANKRD18BA2A2Z9 1011 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 SYNDIG1LA6NDD5 238 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 M0R3H8 397 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 EYA2O00167 538 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 NCAM2O15394 837 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 DDX58O95786 925 aaKnown RBP3.31□□□□□ -1.88
PSPC1-208ENST00000635562 MTHFD1P11586 935 aaKnown RBP3.31□□□□□ -1.88
PSPC1-208ENST00000635562 TYRP14679 529 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 IL2RBP14784 551 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 DDCP20711 480 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 MALP21145 153 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 PAX7P23759 505 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 HOXD10P28358 340 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 PTGS2P35354 604 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 GZMKP49863 264 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 RAB1AP62820 205 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 GRM1Q13255 1194 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 SNAPC2Q13487 334 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 SEMA5AQ13591 1074 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 PLCB4Q15147 1175 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 KRTAP15-1Q3LI76 137 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 PRR16Q569H4 304 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 GPATCH4Q5T3I0 446 aaKnown RBP3.31□□□□□ -1.88
PSPC1-208ENST00000635562 FNDC7Q5VTL7 733 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 SEM1Q6ZVN7 128 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 MAEAQ7L5Y9 396 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 COL23A1Q86Y22 540 aaPredicted RBP3.31□□□□□ -1.88
PSPC1-208ENST00000635562 FAM90A1Q86YD7 464 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 PLXDC1Q8IUK5 500 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 CEP57L1Q8IYX8 460 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 CAMKK1Q8N5S9 505 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 FAM156AQ8NDB6 213 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 MNS1Q8NEH6 495 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 SHCBP1Q8NEM2 672 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 LILRB1Q8NHL6 650 aaPredicted RBP3.31□□□□□ -1.88
PSPC1-208ENST00000635562 MDM1Q8TC05 714 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 CCHCR1Q8TD31 782 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 HDAC2Q92769 488 aaKnown RBP3.31□□□□□ -1.88
PSPC1-208ENST00000635562 SYAP1Q96A49 352 aaPredicted RBP3.31□□□□□ -1.88
PSPC1-208ENST00000635562 TMX3Q96JJ7 454 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 FAM167AQ96KS9 214 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 UROC1Q96N76 676 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 MOGAT1Q96PD6 335 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 NUDT16L1Q9BRJ7 211 aaKnown RBP3.31□□□□□ -1.88
PSPC1-208ENST00000635562 BHMT2Q9H2M3 363 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 LDAHQ9H6V9 325 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 FAM204AQ9H8W3 233 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 AGO4Q9HCK5 861 aaKnown RBP3.31□□□□□ -1.88
PSPC1-208ENST00000635562 IL23AQ9NPF7 189 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 SMC4Q9NTJ3 1288 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 TMEM140Q9NV12 185 aa3.31□□□□□ -1.88
PSPC1-208ENST00000635562 PIH1D1Q9NWS0 290 aaKnown RBP3.31□□□□□ -1.88
PSPC1-208ENST00000635562 TRMT1Q9NXH9 659 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms