RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 USP27XA6NNY8 438 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 BTBD18B2RXH4 712 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 TGM5O43548 720 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 USO1O60763 962 aaKnown RBP5.26□□□□□ -1.57
LINC00550-201ENST00000629293 NPTXRO95502 500 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 HOXA11P31270 313 aaPredicted RBP5.26□□□□□ -1.57
LINC00550-201ENST00000629293 ARPP19P56211 112 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 RILPL1Q5EBL4 403 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 ARMCX5Q6P1M9 558 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 DCLRE1AQ6PJP8 1040 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 CCDC150Q8NCX0 1101 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 C16orf45Q96MC5 204 aaPredicted RBP5.26□□□□□ -1.57
LINC00550-201ENST00000629293 KXD1Q9BQD3 176 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 PAAF1Q9BRP4 392 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 SPATA6Q9NWH7 488 aaPredicted RBP5.26□□□□□ -1.57
LINC00550-201ENST00000629293 MIOSQ9NXC5 875 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 NCDNQ9UBB6 729 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 KCNH3Q9ULD8 1083 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 USP24Q9UPU5 2620 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 A0A096LPE4 126 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 A0A1W2PPZ6 126 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 PROB1E7EW31 1015 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 BIN1O00499 593 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 ZNF623O75123 536 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 SKILP12757 684 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 TNNT1P13805 278 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 PNOCQ13519 176 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 DHX8Q14562 1220 aaKnown RBP5.25□□□□□ -1.57
LINC00550-201ENST00000629293 FAM171A1Q5VUB5 890 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 FUT10Q6P4F1 479 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 NOTUMQ6P988 496 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 C15orf39Q6ZRI6 1047 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 OTUD6AQ7L8S5 288 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 JAMLQ86YT9 394 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 CCAR2Q8N163 923 aaKnown RBP5.25□□□□□ -1.57
LINC00550-201ENST00000629293 COLEC11Q9BWP8 271 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 WDR6Q9NNW5 1121 aaKnown RBP5.25□□□□□ -1.57
LINC00550-201ENST00000629293 MARCH5Q9NX47 278 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 IFNKQ9P0W0 207 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 ZMYM5Q9UJ78 669 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 LAMP2P13473 410 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 CDR1P51861 262 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 MYL5Q02045 173 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 GRIN1Q05586 938 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 SAFBQ15424 915 aaKnown RBP eCLIP5.25□□□□□ -1.57
LINC00550-201ENST00000629293 USP41Q3LFD5 358 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 GLRA4Q5JXX5 417 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 UBXN11Q5T124 520 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 ZC3H14Q6PJT7 736 aaKnown RBP5.25□□□□□ -1.57
LINC00550-201ENST00000629293 TSSK4Q6SA08 328 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 PARM1Q6UWI2 310 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 HACE1Q8IYU2 909 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 SMG8Q8ND04 991 aaKnown RBP5.25□□□□□ -1.57
LINC00550-201ENST00000629293 SPATA20Q8TB22 786 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 ETNPPLQ8TBG4 499 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 GRIN3AQ8TCU5 1115 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 FGF14Q92915 247 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 TNFRSF25Q93038 417 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 CEP44Q9C0F1 390 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 GPRC5CQ9NQ84 441 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 DPP7Q9UHL4 492 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 NDRG2Q9UN36 371 aaKnown RBP5.25□□□□□ -1.57
LINC00550-201ENST00000629293 GDAQ9Y2T3 454 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 PAXBP1Q9Y5B6 917 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 FLNBO75369 2602 aaKnown RBP5.25□□□□□ -1.57
LINC00550-201ENST00000629293 IGKV6-21A0A0C4DH24 114 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 A0A1W2PQH9 124 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 I3L4J1 428 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 LAMTOR5O43504 91 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 TSPAN1O60635 241 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 STBD1O95210 358 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 C8AP07357 584 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 SRFP11831 508 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 ARF4P18085 180 aaPredicted RBP5.25□□□□□ -1.57
LINC00550-201ENST00000629293 TPM4P67936 248 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 ATP11AP98196 1134 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 CSTF1Q05048 431 aaKnown RBP5.25□□□□□ -1.57
LINC00550-201ENST00000629293 ZRSR1Q15695 479 aaKnown RBP5.25□□□□□ -1.57
LINC00550-201ENST00000629293 NPY5RQ15761 445 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 Q4G0T1 1027 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 RTP2Q5QGT7 225 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 PPM1LQ5SGD2 360 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 PPP4R3AQ6IN85 833 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 TRIM46Q7Z4K8 759 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 VN1R5Q7Z5H4 357 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 SRGAP1Q7Z6B7 1085 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 NEK8Q86SG6 692 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 C1orf210Q8IVY1 113 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 RDM1Q8NG50 284 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 OR6P1Q8NGX9 317 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 SLC7A14Q8TBB6 771 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 THAP3Q8WTV1 239 aaPredicted RBP5.25□□□□□ -1.57
LINC00550-201ENST00000629293 ATRIPQ8WXE1 791 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 RUBCNQ92622 972 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 PHF20Q9BVI0 1012 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 NT5C3AQ9H0P0 336 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 GPAMQ9HCL2 828 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 WNT16Q9UBV4 365 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 DNMT3LQ9UJW3 386 aa5.25□□□□□ -1.57
LINC00550-201ENST00000629293 ADAM28Q9UKQ2 775 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms