RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 NOP14P78316 857 aaKnown RBP11.87□□□□□ -0.51
DDX41-219ENST00000629036 MYL7Q01449 175 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 TSPY1Q01534 308 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 SMARCB1Q12824 385 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 PAK1Q13153 545 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 TRPC3Q13507 836 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 SCARA5Q6ZMJ2 495 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 PAQR9Q6ZVX9 377 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 FILIP1Q7Z7B0 1213 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 TRIM59Q8IWR1 403 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 DCP1BQ8IZD4 617 aaKnown RBP11.87□□□□□ -0.51
DDX41-219ENST00000629036 PLCD3Q8N3E9 789 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 WHAMMQ8TF30 809 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 RSAD2Q8WXG1 361 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 ING5Q8WYH8 240 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 TAF4BQ92750 862 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 FGF14Q92915 247 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 FUBP3Q96I24 572 aaKnown RBP eCLIP11.87□□□□□ -0.51
DDX41-219ENST00000629036 TWNKQ96RR1 684 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 TSG101Q99816 390 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 CORO1BQ9BR76 489 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 RPP25Q9BUL9 199 aaKnown RBP11.87□□□□□ -0.51
DDX41-219ENST00000629036 KCNK12Q9HB15 430 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 ABI2Q9NYB9 513 aaPredicted RBP11.87□□□□□ -0.51
DDX41-219ENST00000629036 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.87□□□□□ -0.51
DDX41-219ENST00000629036 NXF1Q9UBU9 619 aaKnown RBP11.87□□□□□ -0.51
DDX41-219ENST00000629036 CDH9Q9ULB4 789 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 KIAA1549LQ6ZVL6 1849 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 GVINP1Q7Z2Y8 2422 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 ZNF292O60281 2723 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 TULP1O00294 542 aaPredicted RBP11.86□□□□□ -0.51
DDX41-219ENST00000629036 PMM2O15305 246 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 PHACTR2O75167 634 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 KRT13P13646 458 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 GJA1P17302 382 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 MAGEA11P43364 429 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 STX17P56962 302 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 TNNC1P63316 161 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 STIM1Q13586 685 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 NFE2Q16621 373 aaPredicted RBP11.86□□□□□ -0.51
DDX41-219ENST00000629036 SGSM1Q2NKQ1 1148 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 ZNF667Q5HYK9 610 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 STXBP5Q5T5C0 1151 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 KRT39Q6A163 491 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 FRMD5Q7Z6J6 570 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 DNAJB7Q7Z6W7 309 aaPredicted RBP11.86□□□□□ -0.51
DDX41-219ENST00000629036 UBR7Q8N806 425 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 B3GALNT2Q8NCR0 500 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 ST13P5Q8NFI4 369 aaPredicted RBP11.86□□□□□ -0.51
DDX41-219ENST00000629036 LMO3Q8TAP4 145 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 MYCBPAPQ8TBZ2 947 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 PCED1BQ96HM7 432 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 ZSWIM3Q96MP5 696 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 GBP4Q96PP9 640 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 MMS19Q96T76 1030 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 ARID3AQ99856 593 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 NUP62CLQ9H1M0 184 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 ARMCX3Q9UH62 379 aaPredicted RBP11.86□□□□□ -0.51
DDX41-219ENST00000629036 RWDD2AQ9UIY3 292 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 SORCS3Q9UPU3 1222 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 PCDHB5Q9Y5E4 795 aa11.86□□□□□ -0.51
DDX41-219ENST00000629036 ZFP37Q9Y6Q3 630 aaPredicted RBP11.86□□□□□ -0.51
DDX41-219ENST00000629036 PROB1E7EW31 1015 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 NARSO43776 548 aaKnown RBP11.85□□□□□ -0.51
DDX41-219ENST00000629036 NOL4O94818 638 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 PDGFRBP09619 1106 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 GBP2P32456 591 aaPredicted RBP11.85□□□□□ -0.51
DDX41-219ENST00000629036 GNL1P36915 607 aaPredicted RBP11.85□□□□□ -0.51
DDX41-219ENST00000629036 TUFMP49411 452 aaKnown RBP11.85□□□□□ -0.51
DDX41-219ENST00000629036 PLD1Q13393 1074 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 MTMR3Q13615 1198 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 MGAT5BQ3V5L5 792 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 MDH1BQ5I0G3 518 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 SDHAF4Q5VUM1 108 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 PARM1Q6UWI2 310 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 FBXL13Q8NEE6 735 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 GPR152Q8TDT2 470 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 ACSF2Q96CM8 615 aaPredicted RBP11.85□□□□□ -0.51
DDX41-219ENST00000629036 RSPRY1Q96DX4 576 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 MYRFLQ96LU7 910 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 SEPT5Q99719 369 aaPredicted RBP11.85□□□□□ -0.51
DDX41-219ENST00000629036 B3GNT5Q9BYG0 378 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 ZNF518BQ9C0D4 1074 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 NIF3L1Q9GZT8 377 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 MMRN2Q9H8L6 949 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.85□□□□□ -0.518e-9■■■■■ 103.2
DDX41-219ENST00000629036 ASAH2Q9NR71 780 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 IGSF9Q9P2J2 1179 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 DUSP12Q9UNI6 340 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 MRPS23Q9Y3D9 190 aaKnown RBP11.85□□□□□ -0.51
DDX41-219ENST00000629036 ASB3Q9Y575 518 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 NUMBLQ9Y6R0 609 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 FRYLO94915 3013 aa11.85□□□□□ -0.51
DDX41-219ENST00000629036 CACNA1GO43497 2377 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 MYOFQ9NZM1 2061 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 MED19A0JLT2 244 aaPredicted RBP11.84□□□□□ -0.51
DDX41-219ENST00000629036 BICDL2A1A5D9 508 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 GALR2O43603 387 aaPredicted RBP11.84□□□□□ -0.51
DDX41-219ENST00000629036 CILPO75339 1184 aa11.84□□□□□ -0.51
DDX41-219ENST00000629036 F11P03951 625 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms