RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 FAM83CQ9BQN1 747 aa17.78■□□□□ 0.44
PDCD6-214ENST00000628729 FAM126AQ9BYI3 521 aaPredicted RBP17.78■□□□□ 0.44
PDCD6-214ENST00000628729 ABCB6Q9NP58 842 aa17.78■□□□□ 0.44
PDCD6-214ENST00000628729 PARD6AQ9NPB6 346 aa17.78■□□□□ 0.44
PDCD6-214ENST00000628729 NCDNQ9UBB6 729 aa17.78■□□□□ 0.44
PDCD6-214ENST00000628729 LMO2P25791 158 aa17.77■□□□□ 0.44
PDCD6-214ENST00000628729 RBP5P82980 135 aa17.77■□□□□ 0.44
PDCD6-214ENST00000628729 SRSF5Q13243 272 aaKnown RBP17.77■□□□□ 0.44
PDCD6-214ENST00000628729 TAF12Q16514 161 aa17.77■□□□□ 0.44
PDCD6-214ENST00000628729 LPAL2Q16609 132 aa17.77■□□□□ 0.44
PDCD6-214ENST00000628729 CFAP221Q4G0U5 840 aa17.77■□□□□ 0.44
PDCD6-214ENST00000628729 FAM26FQ5R3K3 315 aa17.77■□□□□ 0.44
PDCD6-214ENST00000628729 SPEM1Q8N4L4 309 aa17.77■□□□□ 0.44
PDCD6-214ENST00000628729 ZNF507Q8TCN5 953 aa17.77■□□□□ 0.44
PDCD6-214ENST00000628729 SCFD1Q8WVM8 642 aa17.77■□□□□ 0.44
PDCD6-214ENST00000628729 SNX21Q969T3 373 aa17.77■□□□□ 0.44
PDCD6-214ENST00000628729 TRMT2BQ96GJ1 504 aaKnown RBP17.77■□□□□ 0.44
PDCD6-214ENST00000628729 ANKRD36BP1Q96IX9 119 aa17.77■□□□□ 0.44
PDCD6-214ENST00000628729 CUEDC2Q9H467 287 aa17.77■□□□□ 0.44
PDCD6-214ENST00000628729 CRTAC1Q9NQ79 661 aa17.77■□□□□ 0.44
PDCD6-214ENST00000628729 AGPAT3Q9NRZ7 376 aa17.77■□□□□ 0.44
PDCD6-214ENST00000628729 GKN1Q9NS71 199 aa17.77■□□□□ 0.44
PDCD6-214ENST00000628729 NCOR2Q9Y618 2525 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 ZNF233A6NK53 670 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 CUTAO60888 179 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 PAPSS2O95340 614 aaPredicted RBP17.76■□□□□ 0.43
PDCD6-214ENST00000628729 CSH1P0DML2 217 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 CSH2P0DML3 217 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 ARSAP15289 507 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 CXCL12P48061 93 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 PLCB2Q00722 1185 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 MYL7Q01449 175 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 LRRC32Q14392 662 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 ITPRIPL2Q3MIP1 535 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 FAM171BQ6P995 826 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 C1orf228Q6PIY5 440 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 MON1AQ86VX9 555 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 NELFCDQ8IXH7 590 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 SPATA18Q8TC71 538 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 HPDLQ96IR7 371 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 MYRFLQ96LU7 910 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 ZNF396Q96N95 335 aaPredicted RBP17.76■□□□□ 0.43
PDCD6-214ENST00000628729 C7orf25Q9BPX7 421 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 BLZF1Q9H2G9 400 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 EBF3Q9H4W6 596 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 TDP1Q9NUW8 608 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 DLL3Q9NYJ7 618 aa17.76■□□□□ 0.43
PDCD6-214ENST00000628729 EML5Q05BV3 1969 aa17.75■□□□□ 0.43
PDCD6-214ENST00000628729 MED19A0JLT2 244 aaPredicted RBP17.75■□□□□ 0.43
PDCD6-214ENST00000628729 CHURC1-FNTBB4DL54 471 aa17.75■□□□□ 0.43
PDCD6-214ENST00000628729 KIAA0391O15091 583 aaKnown RBP17.75■□□□□ 0.43
PDCD6-214ENST00000628729 DDX6P26196 483 aaKnown RBP eCLIP17.75■□□□□ 0.434e-11■□□□□ 9.8
PDCD6-214ENST00000628729 AVPR1AP37288 418 aa17.75■□□□□ 0.43
PDCD6-214ENST00000628729 FNTBP49356 437 aa17.75■□□□□ 0.43
PDCD6-214ENST00000628729 FOXK2Q01167 660 aa17.75■□□□□ 0.43
PDCD6-214ENST00000628729 SNRNP35Q16560 246 aaKnown RBP17.75■□□□□ 0.43
PDCD6-214ENST00000628729 FSTL4Q6MZW2 842 aa17.75■□□□□ 0.43
PDCD6-214ENST00000628729 WDR49Q8IV35 697 aa17.75■□□□□ 0.43
PDCD6-214ENST00000628729 MYLPFQ96A32 169 aa17.75■□□□□ 0.43
PDCD6-214ENST00000628729 SYT15Q9BQS2 421 aa17.75■□□□□ 0.43
PDCD6-214ENST00000628729 TMEM30AQ9NV96 361 aa17.75■□□□□ 0.43
PDCD6-214ENST00000628729 CLIC2O15247 247 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 POLR2DO15514 142 aaKnown RBP17.74■□□□□ 0.43
PDCD6-214ENST00000628729 HRO43593 1189 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 F13A1P00488 732 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 TNNC2P02585 160 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 ZSCAN22P10073 491 aaPredicted RBP17.74■□□□□ 0.43
PDCD6-214ENST00000628729 PCSK1P29120 753 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 LHX1P48742 406 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 CYP2J2P51589 502 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 RPL10AP62906 217 aaKnown RBP17.74■□□□□ 0.43
PDCD6-214ENST00000628729 CYP24A1Q07973 514 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 USP4Q13107 963 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 ZNF77Q15935 545 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 DGKKQ5KSL6 1271 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 STXBP4Q6ZWJ1 553 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 UNC13DQ70J99 1090 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 TRAPPC11Q7Z392 1133 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 SPATA2LQ8IUW3 424 aaPredicted RBP17.74■□□□□ 0.43
PDCD6-214ENST00000628729 SCN4BQ8IWT1 228 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 GRAMD1CQ8IYS0 662 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 IQUBQ8NA54 791 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 RDH13Q8NBN7 331 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 PLEKHO2Q8TD55 490 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 MRPS31Q92665 395 aaKnown RBP17.74■□□□□ 0.43
PDCD6-214ENST00000628729 FUBP3Q96I24 572 aaKnown RBP eCLIP17.74■□□□□ 0.43
PDCD6-214ENST00000628729 CYP2S1Q96SQ9 504 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 CGRRF1Q99675 332 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 MRPL45Q9BRJ2 306 aaKnown RBP17.74■□□□□ 0.43
PDCD6-214ENST00000628729 KIF9Q9HAQ2 790 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 FBRSL1Q9HCM7 1045 aaKnown RBP17.74■□□□□ 0.43
PDCD6-214ENST00000628729 POLR3BQ9NW08 1133 aaPredicted RBP17.74■□□□□ 0.43
PDCD6-214ENST00000628729 ZMYM5Q9UJ78 669 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 PCDHA7Q9UN72 937 aa17.74■□□□□ 0.43
PDCD6-214ENST00000628729 UBE4BO95155 1302 aa17.73■□□□□ 0.43
PDCD6-214ENST00000628729 C2orf78A6NCI8 922 aa17.73■□□□□ 0.43
PDCD6-214ENST00000628729 CST3P01034 146 aaPredicted RBP17.73■□□□□ 0.43
PDCD6-214ENST00000628729 DLATP10515 647 aaKnown RBP17.73■□□□□ 0.43
PDCD6-214ENST00000628729 WARSP23381 471 aaKnown RBP17.73■□□□□ 0.43
PDCD6-214ENST00000628729 MAGEA11P43364 429 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms