RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 PTCHD3Q3KNS1 767 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 AMOTQ4VCS5 1084 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 RBM20Q5T481 1227 aaKnown RBP3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 PLAG1Q6DJT9 500 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 GGT6Q6P531 493 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 KIAA0408Q6ZU52 694 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 USP49Q70CQ1 688 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 BEND5Q7L4P6 421 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 MYLK4Q86YV6 388 aaPredicted RBP3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 YAF2Q8IY57 180 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 SYTL1Q8IYJ3 562 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 FAM9AQ8IZU1 332 aaPredicted RBP3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 TMEM132CQ8N3T6 1108 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 ANKRD42Q8N9B4 389 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 BPIFB1Q8TDL5 484 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 ZNF384Q8TF68 577 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 STYXQ8WUJ0 223 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 MUL1Q969V5 352 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 RNF31Q96EP0 1072 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 PPP1R9BQ96SB3 815 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 DCLRE1CQ96SD1 692 aaKnown RBP3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 SLC46A2Q9BY10 475 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 REXO4Q9GZR2 422 aaKnown RBP3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 KLC2Q9H0B6 622 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 OBP2BQ9NPH6 170 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 AKIP1Q9NQ31 210 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 HEYLQ9NQ87 328 aaPredicted RBP3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 XPNPEP3Q9NQH7 507 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 RGL1Q9NZL6 768 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 LUZP4Q9P127 313 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 DKK2Q9UBU2 259 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 SSX2IPQ9Y2D8 614 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 TCAF1Q9Y4C2 921 aa3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 ARID1BQ8NFD5 2236 aaPredicted RBP3.31□□□□□ -1.88
SCARNA4-202ENST00000625402 UNC119BA6NIH7 251 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 E7ENX8 843 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 AGPSO00116 658 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 TRIM38O00635 465 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 PCDH17O14917 1159 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 AREL1O15033 823 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 NPC1O15118 1278 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 MUSKO15146 869 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 FFAR2O15552 330 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 CCP110O43303 1012 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 KCNQ3O43525 872 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 SRGAP2O75044 1071 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 ERN1O75460 977 aaKnown RBP3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 SPDEFO95238 335 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 CSTBP04080 98 aaKnown RBP3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 PDHA1P08559 390 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 ARP10275 920 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 CYP2C9P11712 490 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 PECAM1P16284 738 aaPredicted RBP3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 GATA3P23771 443 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 ADORA2AP29274 412 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 NPTX2P47972 431 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 PXNP49023 591 aaPredicted RBP3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 DGKEP52429 567 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 VAV2P52735 878 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 TAP2Q03519 686 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 ICA1Q05084 483 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 DYRK1AQ13627 763 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 SLC29A2Q14542 456 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 PRKD1Q15139 912 aaPredicted RBP3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 ZNF750Q32MQ0 723 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 HS1BP3Q53T59 392 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 ARHGAP40Q5TG30 622 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 CACHD1Q5VU97 1274 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 RAP1GAP2Q684P5 730 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 RGS7BPQ6MZT1 257 aaPredicted RBP3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 TLDC1Q6P9B6 456 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 FBXO38Q6PIJ6 1188 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 KRT28Q7Z3Y7 464 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 CLNKQ7Z7G1 428 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 CCDC28AQ8IWP9 274 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 MYCT1Q8N699 235 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 TTC9BQ8N6N2 239 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 ATG16L2Q8NAA4 619 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 ZNF527Q8NB42 609 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 CPEB3Q8NE35 698 aaKnown RBP3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 OR1N1Q8NGS0 311 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 CXorf38Q8TB03 319 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 DNAJB14Q8TBM8 379 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 TMEM171Q8WVE6 324 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 EXTL1Q92935 676 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 MED15Q96RN5 788 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 RMDN3Q96TC7 470 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 MAGEB5Q9BZ81 275 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 MAGEH1Q9H213 219 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 DHX36Q9H2U1 1008 aaKnown RBP3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 UNKLQ9H9P5 680 aaKnown RBP3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 SMPD4Q9NXE4 827 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 SAGE1Q9NXZ1 904 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 RNF181Q9P0P0 153 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 DKK4Q9UBT3 224 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 VPS51Q9UID3 782 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 SERTAD3Q9UJW9 196 aa3.3□□□□□ -1.88
SCARNA4-202ENST00000625402 NDRG4Q9ULP0 352 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms