RNA–Protein interactions for RNA: ENST00000625349.2

LUC7L3-223, Transcript of LUC7 like 3 pre-mRNA splicing factor, human

TSL 2 BASIC

Gene LUC7L3, Length 408 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LUC7L3-223	ENST00000625349	PPM1L	Q5SGD2	360 aa		13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	C1orf220	Q5T0J3	134 aa		13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	FAM171A1	Q5VUB5	890 aa		13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	RTL10	Q7L3V2	364 aa		13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	CDR2L	Q86X02	465 aa	Predicted RBP	13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	CBWD2	Q8IUF1	395 aa		13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	BRSK2	Q8IWQ3	736 aa		13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	SUMF1	Q8NBK3	374 aa		13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	FBXL13	Q8NEE6	735 aa		13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	CPLX3	Q8WVH0	158 aa		13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	FNBP1	Q96RU3	617 aa		13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	PAAF1	Q9BRP4	392 aa		13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	ASB7	Q9H672	318 aa		13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	PLEKHA5	Q9HAU0	1116 aa		13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	DLL3	Q9NYJ7	618 aa		13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	CACNG4	Q9UBN1	327 aa		13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	APEX2	Q9UBZ4	518 aa		13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	CPSF3	Q9UKF6	684 aa	Known RBP	13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	FBXO4	Q9UKT5	387 aa		13.51	□□□□□ -0.25
LUC7L3-223	ENST00000625349	USP24	Q9UPU5	2620 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	ATP8B3	O60423	1300 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	CASTOR2	A6NHX0	329 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	PTGES	O14684	152 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	SPTLC1	O15269	473 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	LCA5L	O95447	670 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	SERPING1	P05155	500 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	C8A	P07357	584 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	CYLC1	P35663	651 aa	Predicted RBP	13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	PRKCI	P41743	596 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	MXI1	P50539	228 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	KRT83	P78385	493 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	NTHL1	P78549	312 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	MYL7	Q01449	175 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	PFKP	Q01813	784 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	DCAF4L1	Q3SXM0	396 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	ZACN	Q401N2	412 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	SLC44A4	Q53GD3	710 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	WDR59	Q6PJI9	974 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	WDR49	Q8IV35	697 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	CCAR2	Q8N163	923 aa	Known RBP	13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	HASPIN	Q8TF76	798 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	HINFP	Q9BQA5	517 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	ADPGK	Q9BRR6	497 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	FAM213A	Q9BRX8	229 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	TCHP	Q9BT92	498 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	BCO2	Q9BYV7	579 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	IKZF4	Q9H2S9	585 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	GCNT4	Q9P109	453 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	NOTCH4	Q99466	2003 aa		13.5	□□□□□ -0.25
LUC7L3-223	ENST00000625349	VWA8	A3KMH1	1905 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	EIF3CL	B5ME19	914 aa	Known RBP	13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	TISP43	B9A030	160 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	RNF225	M0QZC1	329 aa	Predicted RBP	13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	CCL16	O15467	120 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	ADAM12	O43184	909 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	LRRN2	O75325	713 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	TH	P07101	528 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	CCDC175	P0C221	793 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	JAM2	P57087	298 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	GCNT1	Q02742	428 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	PPP3CA	Q08209	521 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	RAB33A	Q14088	237 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	NAB2	Q15742	525 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	C10orf76	Q5T2E6	689 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	SFMBT2	Q5VUG0	894 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	E4F1	Q66K89	784 aa	Predicted RBP	13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	CEP57	Q86XR8	500 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	DCLK2	Q8N568	766 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	RDH13	Q8NBN7	331 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	TAF4B	Q92750	862 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	EIF3C	Q99613	913 aa	Known RBP	13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	CGRRF1	Q99675	332 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	LSM14B	Q9BX40	385 aa	Known RBP	13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	PDZD7	Q9H5P4	517 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	SIX2	Q9NPC8	291 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	LUC7L	Q9NQ29	371 aa	Known RBP	13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	RBAK	Q9NYW8	714 aa	Predicted RBP	13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	PYCARD	Q9ULZ3	195 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	DERA	Q9Y315	318 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	PCDHGA2	Q9Y5H1	932 aa		13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.49	□□□□□ -0.25
LUC7L3-223	ENST00000625349	FAM170B	A6NMN3	283 aa		13.48	□□□□□ -0.25
LUC7L3-223	ENST00000625349	TTLL13P	A6NNM8	815 aa		13.48	□□□□□ -0.25
LUC7L3-223	ENST00000625349	TMEM189-UBE2V1	I3L0A0	370 aa		13.48	□□□□□ -0.25
LUC7L3-223	ENST00000625349	LAMTOR5	O43504	91 aa		13.48	□□□□□ -0.25
LUC7L3-223	ENST00000625349	RECQL4	O94761	1208 aa		13.48	□□□□□ -0.25
LUC7L3-223	ENST00000625349	IPO7	O95373	1038 aa	Known RBP	13.48	□□□□□ -0.25
LUC7L3-223	ENST00000625349	C4BPA	P04003	597 aa	Known RBP	13.48	□□□□□ -0.25
LUC7L3-223	ENST00000625349	FER	P16591	822 aa		13.48	□□□□□ -0.25
LUC7L3-223	ENST00000625349	SLC9A1	P19634	815 aa		13.48	□□□□□ -0.25
LUC7L3-223	ENST00000625349	POLR2F	P61218	127 aa	Known RBP	13.48	□□□□□ -0.25
LUC7L3-223	ENST00000625349	DUOXA2	Q1HG44	320 aa		13.48	□□□□□ -0.25
LUC7L3-223	ENST00000625349	CBWD6	Q4V339	395 aa		13.48	□□□□□ -0.25
LUC7L3-223	ENST00000625349	CBWD3	Q5JTY5	395 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms