RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 CFHP08603 1231 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 GLULP15104 373 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 HMGA1P17096 107 aaKnown RBP13.29□□□□□ -0.28
LINC00963-217ENST00000624009 PFKLP17858 780 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 GABRR2P28476 465 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 PTPN5P54829 565 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 GPC5P78333 572 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 FKBP3Q00688 224 aaKnown RBP13.29□□□□□ -0.28
LINC00963-217ENST00000624009 FCHO2Q0JRZ9 810 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 STIM1Q13586 685 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 TEAD2Q15562 447 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 TAF12Q16514 161 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 CWF19L1Q69YN2 538 aaKnown RBP13.29□□□□□ -0.28
LINC00963-217ENST00000624009 TANGO2Q6ICL3 276 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 C1orf228Q6PIY5 440 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 POTEHQ6S545 545 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 MFSD6LQ8IWD5 586 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 FAM186BQ8IYM0 893 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 ADSSL1Q8N142 457 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 ZSCAN18Q8TBC5 510 aaPredicted RBP13.29□□□□□ -0.28
LINC00963-217ENST00000624009 IRF7Q92985 503 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 MSANTD3Q96H12 275 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 LPIN3Q9BQK8 851 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 SLITRK6Q9H5Y7 841 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 TASP1Q9H6P5 420 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 MAGEC2Q9UBF1 373 aaPredicted RBP13.29□□□□□ -0.28
LINC00963-217ENST00000624009 MYO15AQ9UKN7 3530 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 ZNF292O60281 2723 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 MYBPHLA2RUH7 354 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 PSMA7O14818 248 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 GALR2O43603 387 aaPredicted RBP13.28□□□□□ -0.28
LINC00963-217ENST00000624009 SOAT2O75908 522 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 VNN1O95497 513 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 EPB41P11171 864 aaKnown RBP13.28□□□□□ -0.28
LINC00963-217ENST00000624009 TRIM21P19474 475 aaKnown RBP13.28□□□□□ -0.28
LINC00963-217ENST00000624009 ACAT1P24752 427 aaKnown RBP13.28□□□□□ -0.28
LINC00963-217ENST00000624009 CYP2F1P24903 491 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 LMO2P25791 158 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 ANP32AP39687 249 aaKnown RBP13.28□□□□□ -0.28
LINC00963-217ENST00000624009 PRCPP42785 496 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 MAGEA9P43362 315 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 PPP3CCP48454 512 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 VCPP55072 806 aaKnown RBP13.28□□□□□ -0.28
LINC00963-217ENST00000624009 UBE2HP62256 183 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 DLG4P78352 724 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 C1orf220Q5T0J3 134 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 UNC93AQ86WB7 457 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 TTC39CQ8N584 583 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 OR6B3Q8NGW1 331 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 FAM200AQ8TCP9 573 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 FAM122AQ96E09 287 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 DHTKD1Q96HY7 919 aaPredicted RBP13.28□□□□□ -0.28
LINC00963-217ENST00000624009 TNIP3Q96KP6 325 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 ZSWIM3Q96MP5 696 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 NELL2Q99435 816 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 TSG101Q99816 390 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 KXD1Q9BQD3 176 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 MRPL45Q9BRJ2 306 aaKnown RBP13.28□□□□□ -0.28
LINC00963-217ENST00000624009 PI4K2AQ9BTU6 479 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 TRMT61BQ9BVS5 477 aaKnown RBP13.28□□□□□ -0.28
LINC00963-217ENST00000624009 IMPG2Q9BZV3 1241 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 ELOVL4Q9GZR5 314 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 ATXN3LQ9H3M9 355 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 TMEM8AQ9HCN3 771 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 ZNF334Q9HCZ1 680 aaPredicted RBP13.28□□□□□ -0.28
LINC00963-217ENST00000624009 CRTAC1Q9NQ79 661 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 MAPK8IP1Q9UQF2 711 aa13.28□□□□□ -0.28
LINC00963-217ENST00000624009 USP34Q70CQ2 3546 aa13.27□□□□□ -0.28
LINC00963-217ENST00000624009 PATJQ8NI35 1801 aa13.27□□□□□ -0.28
LINC00963-217ENST00000624009 OTOGLQ3ZCN5 2332 aa13.27□□□□□ -0.28
LINC00963-217ENST00000624009 NRG2O14511 850 aaPredicted RBP13.27□□□□□ -0.29
LINC00963-217ENST00000624009 CHADO15335 359 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 F11P03951 625 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 PTPN1P18031 435 aaKnown RBP13.27□□□□□ -0.29
LINC00963-217ENST00000624009 PDE6CP51160 858 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 NLRP12P59046 1061 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 NOP14P78316 857 aaKnown RBP13.27□□□□□ -0.29
LINC00963-217ENST00000624009 PLCB2Q00722 1185 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 ZNF268Q14587 947 aaPredicted RBP13.27□□□□□ -0.29
LINC00963-217ENST00000624009 MLF2Q15773 248 aaPredicted RBP13.27□□□□□ -0.29
LINC00963-217ENST00000624009 SLC44A4Q53GD3 710 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 KRT39Q6A163 491 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 CLEC17AQ6ZS10 378 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 TMEM150AQ86TG1 271 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 ARID3BQ8IVW6 561 aaPredicted RBP13.27□□□□□ -0.29
LINC00963-217ENST00000624009 KIAA1958Q8N8K9 716 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 TMEM105Q8N8V8 129 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 MYLPFQ96A32 169 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 PCED1BQ96HM7 432 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 C8orf48Q96LL4 319 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 BCO2Q9BYV7 579 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 DNAI2Q9GZS0 605 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 TBC1D17Q9HA65 648 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 KIF9Q9HAQ2 790 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 CYP3A43Q9HB55 503 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 RAPGEFL1Q9UHV5 662 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 SPTBN4Q9H254 2564 aa13.27□□□□□ -0.29
LINC00963-217ENST00000624009 KANSL1LA0AUZ9 987 aa13.26□□□□□ -0.29
LINC00963-217ENST00000624009 A8MXQ7 604 aa13.26□□□□□ -0.29
LINC00963-217ENST00000624009 ARNTLO00327 626 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms