RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 C12orf29Q8N999 325 aa7.41□□□□□ -1.22
CBWD3-219ENST00000622817 MNS1Q8NEH6 495 aa7.41□□□□□ -1.22
CBWD3-219ENST00000622817 C18orf8Q96DM3 657 aa7.41□□□□□ -1.22
CBWD3-219ENST00000622817 FAM193BQ96PV7 902 aaPredicted RBP7.41□□□□□ -1.22
CBWD3-219ENST00000622817 OSBPL9Q96SU4 736 aa7.41□□□□□ -1.22
CBWD3-219ENST00000622817 PAAF1Q9BRP4 392 aa7.41□□□□□ -1.22
CBWD3-219ENST00000622817 ABCB6Q9NP58 842 aa7.41□□□□□ -1.22
CBWD3-219ENST00000622817 TBC1D13Q9NVG8 400 aa7.41□□□□□ -1.22
CBWD3-219ENST00000622817 WDR35Q9P2L0 1181 aa7.41□□□□□ -1.22
CBWD3-219ENST00000622817 CACNG4Q9UBN1 327 aa7.41□□□□□ -1.22
CBWD3-219ENST00000622817 LCMT1Q9UIC8 334 aa7.41□□□□□ -1.22
CBWD3-219ENST00000622817 TSPAN16Q9UKR8 245 aa7.41□□□□□ -1.22
CBWD3-219ENST00000622817 NME7Q9Y5B8 376 aa7.41□□□□□ -1.22
CBWD3-219ENST00000622817 TANC1Q9C0D5 1861 aa7.4□□□□□ -1.22
CBWD3-219ENST00000622817 MIF4GDA9UHW6 222 aaKnown RBP7.4□□□□□ -1.23
CBWD3-219ENST00000622817 TMEM189-UBE2V1I3L0A0 370 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 M0QZQ0 153 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 MYO1FO00160 1098 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 KIAA0355O15063 1070 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 DDHD2O94830 711 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 KIF4AO95239 1232 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 TIMP1P01033 207 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 PTPN1P18031 435 aaKnown RBP7.4□□□□□ -1.23
CBWD3-219ENST00000622817 IGFBP6P24592 240 aaPredicted RBP7.4□□□□□ -1.23
CBWD3-219ENST00000622817 PCSK1P29120 753 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 TAP1Q03518 808 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 CKAP4Q07065 602 aaKnown RBP7.4□□□□□ -1.23
CBWD3-219ENST00000622817 PDCLQ13371 301 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 ZNF268Q14587 947 aaPredicted RBP7.4□□□□□ -1.23
CBWD3-219ENST00000622817 MESDQ14696 234 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 TCTN1Q2MV58 587 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 PPP1R26Q5T8A7 1209 aaPredicted RBP7.4□□□□□ -1.23
CBWD3-219ENST00000622817 DNAJC24Q6P3W2 148 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 CD300LGQ6UXG3 332 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 DNAH12Q6ZR08 3092 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 NT5DC3Q86UY8 548 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 OSTM1Q86WC4 334 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 ZNF280BQ86YH2 543 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 CRIPAKQ8N1N5 446 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 B3GALNT2Q8NCR0 500 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 C3orf58Q8NDZ4 430 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 UBA3Q8TBC4 463 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 IPO4Q8TEX9 1081 aaKnown RBP7.4□□□□□ -1.23
CBWD3-219ENST00000622817 RABGGTAQ92696 567 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 SUSD3Q96L08 255 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 CARD6Q9BX69 1037 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 MRPL9Q9BYD2 267 aaKnown RBP7.4□□□□□ -1.23
CBWD3-219ENST00000622817 DPEP3Q9H4B8 488 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 SYNCQ9H7C4 482 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 FAM49BQ9NUQ9 324 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 RNF14Q9UBS8 474 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 CHORDC1Q9UHD1 332 aaPredicted RBP7.4□□□□□ -1.23
CBWD3-219ENST00000622817 CYTH4Q9UIA0 394 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 ALG6Q9Y672 507 aa7.4□□□□□ -1.23
CBWD3-219ENST00000622817 TDRD15B5MCY1 1934 aaKnown RBP7.4□□□□□ -1.23
CBWD3-219ENST00000622817 TET1Q8NFU7 2136 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.39□□□□□ -1.23
CBWD3-219ENST00000622817 TMEM110-MUSTN1A8MSY1 372 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 CES2O00748 559 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 TRAPPC3O43617 180 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 SRGAP2O75044 1071 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 CYP11A1P05108 521 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 PFKMP08237 780 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 TYMPP19971 482 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 GTF2F1P35269 517 aaKnown RBP eCLIP7.39□□□□□ -1.23
CBWD3-219ENST00000622817 SLC1A1P43005 524 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 GABRB2P47870 512 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 OR1G1P47890 313 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 BCAT1P54687 386 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 GSCP56915 257 aaPredicted RBP7.39□□□□□ -1.23
CBWD3-219ENST00000622817 PSMC1P62191 440 aaKnown RBP7.39□□□□□ -1.23
CBWD3-219ENST00000622817 TUBB4BP68371 445 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 PTPN20Q4JDL3 420 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 PKDCCQ504Y2 493 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 C2CD6Q53TS8 623 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 PHLDB2Q86SQ0 1253 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 ANKRD52Q8NB46 1076 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 C3orf20Q8ND61 904 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 FEZF2Q8TBJ5 459 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 STK32AQ8WU08 396 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 HES6Q96HZ4 224 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 PBKQ96KB5 322 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 CASD1Q96PB1 797 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 CPXM1Q96SM3 734 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 HNRNPABQ99729 332 aaKnown RBP7.39□□□□□ -1.23
CBWD3-219ENST00000622817 SELENOOQ9BVL4 669 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 ADAM33Q9BZ11 813 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 GOLPH3Q9H4A6 298 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 PRDM10Q9NQV6 1147 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 DDX43Q9NXZ2 648 aaKnown RBP7.39□□□□□ -1.23
CBWD3-219ENST00000622817 ANAPC7Q9UJX3 599 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 CDH9Q9ULB4 789 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 CEP350Q5VT06 3117 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 TTC3P53804 2025 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 SCN5AQ14524 2016 aa7.39□□□□□ -1.23
CBWD3-219ENST00000622817 UQCRHLA0A096LP55 91 aa7.38□□□□□ -1.23
CBWD3-219ENST00000622817 ABHD14A-ACY1A0A1B0GW23 586 aa7.38□□□□□ -1.23
CBWD3-219ENST00000622817 TCRBV5S1A1TA0A578 114 aa7.38□□□□□ -1.23
CBWD3-219ENST00000622817 CTAGE15A4D2H0 777 aa7.38□□□□□ -1.23
CBWD3-219ENST00000622817 TRIM43BA6NCK2 446 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms