RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 PARP10Q53GL7 1025 aa8.28□□□□□ -1.08
VPS11-209ENST00000622309 DHRS4L2Q6PKH6 230 aa8.28□□□□□ -1.08
VPS11-209ENST00000622309 FIP1L1Q6UN15 594 aaKnown RBP8.28□□□□□ -1.08
VPS11-209ENST00000622309 LDHAL6AQ6ZMR3 332 aa8.28□□□□□ -1.08
VPS11-209ENST00000622309 NLRX1Q86UT6 975 aa8.28□□□□□ -1.08
VPS11-209ENST00000622309 ANKMY2Q8IV38 441 aa8.28□□□□□ -1.08
VPS11-209ENST00000622309 AHI1Q8N157 1196 aa8.28□□□□□ -1.08
VPS11-209ENST00000622309 ENAHQ8N8S7 591 aaPredicted RBP8.28□□□□□ -1.08
VPS11-209ENST00000622309 PDZD8Q8NEN9 1154 aa8.28□□□□□ -1.08
VPS11-209ENST00000622309 SCFD1Q8WVM8 642 aa8.28□□□□□ -1.08
VPS11-209ENST00000622309 PLEKHA8Q96JA3 519 aa8.28□□□□□ -1.08
VPS11-209ENST00000622309 NUF2Q9BZD4 464 aa8.28□□□□□ -1.08
VPS11-209ENST00000622309 PTPRHQ9HD43 1115 aa8.28□□□□□ -1.08
VPS11-209ENST00000622309 CYLDQ9NQC7 956 aa8.28□□□□□ -1.08
VPS11-209ENST00000622309 ARMCX1Q9P291 453 aa8.28□□□□□ -1.08
VPS11-209ENST00000622309 RABGEF1Q9UJ41 708 aa8.28□□□□□ -1.08
VPS11-209ENST00000622309 A0A088AWK7 358 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 ANKRD63C9JTQ0 380 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 TRAF5O00463 557 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 FCHO1O14526 889 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 DDX3YO15523 660 aaKnown RBP8.27□□□□□ -1.09
VPS11-209ENST00000622309 ENO2P09104 434 aaPredicted RBP8.27□□□□□ -1.09
VPS11-209ENST00000622309 RCVRNP35243 200 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 CBLBQ13191 982 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 TLR1Q15399 786 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 KCNJ8Q15842 424 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 PHKG1Q16816 387 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 ZNF829Q3KNS6 432 aaPredicted RBP8.27□□□□□ -1.09
VPS11-209ENST00000622309 RABGAP1LQ5R372 815 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 SEL1L2Q5TEA6 688 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 DCAF12L1Q5VU92 463 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 LVRNQ6Q4G3 990 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 C4orf33Q8N1A6 199 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 UBL4BQ8N7F7 174 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 PRELID2Q8N945 189 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 KIAA0895Q8NCT3 520 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 RBM15BQ8NDT2 890 aaKnown RBP8.27□□□□□ -1.09
VPS11-209ENST00000622309 SLC16A10Q8TF71 515 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 CDHR1Q96JP9 859 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 TMEM120AQ9BXJ8 343 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 SLC38A7Q9NVC3 462 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 PKD1L3Q7Z443 1732 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 CAPN8A6NHC0 703 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 FAM58BPP0C7Q3 252 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 CETPP11597 493 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 PLCG1P19174 1290 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 RPA3P35244 121 aaPredicted RBP8.27□□□□□ -1.09
VPS11-209ENST00000622309 HSD17B4P51659 736 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 KDSRQ06136 332 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 ZNF804AQ7Z570 1209 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 POU5F2Q8N7G0 328 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 SUN5Q8TC36 379 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 RBM15Q96T37 977 aaKnown RBP eCLIP8.27□□□□□ -1.096e-7■■■■■ 36.2
VPS11-209ENST00000622309 KLHL25Q9H0H3 589 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 GLT8D2Q9H1C3 349 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 RIC8AQ9NPQ8 531 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 KCPQ6ZWJ8 1503 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 ECM29Q5VYK3 1845 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 SOBPA7XYQ1 873 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 POTECB2RU33 542 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 GNPATO15228 680 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 DENRO43583 198 aaKnown RBP8.27□□□□□ -1.09
VPS11-209ENST00000622309 GRIN3BO60391 1043 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 PTPN2P17706 415 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 KRT4P19013 534 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 KCNJ1P48048 391 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 CSE1LP55060 971 aaKnown RBP8.27□□□□□ -1.09
VPS11-209ENST00000622309 ZNF200P98182 395 aaPredicted RBP8.27□□□□□ -1.09
VPS11-209ENST00000622309 HIC1Q14526 733 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 RGS21Q2M5E4 152 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 EFHC1Q5JVL4 640 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 OGFOD2Q6N063 350 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 RWDD4Q6NW29 188 aaKnown RBP8.27□□□□□ -1.09
VPS11-209ENST00000622309 ELMSAN1Q6PJG2 1045 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 PAOXQ6QHF9 649 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 SPERTQ8NA61 448 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 DENND1AQ8TEH3 1009 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 OTUD5Q96G74 571 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 PRR11Q96HE9 360 aaPredicted RBP8.27□□□□□ -1.09
VPS11-209ENST00000622309 C7orf25Q9BPX7 421 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 ISCA1Q9BUE6 129 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 CCSER1Q9C0I3 900 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 ZNF696Q9H7X3 374 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 OSGEPQ9NPF4 335 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 TYW1Q9NV66 732 aaKnown RBP8.27□□□□□ -1.09
VPS11-209ENST00000622309 VPS51Q9UID3 782 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 ADAMTS6Q9UKP5 1117 aa8.27□□□□□ -1.09
VPS11-209ENST00000622309 FLT1P17948 1338 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 EXOC1LA0A1B0GW35 172 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 GOLGA8CPA6NN73 597 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 POC1B-GALNT4F8VUJ3 575 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 IRS4O14654 1257 aaPredicted RBP8.26□□□□□ -1.09
VPS11-209ENST00000622309 PRPF4O43172 522 aaKnown RBP eCLIP8.26□□□□□ -1.09
VPS11-209ENST00000622309 THRAP10827 490 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 CHRNB1P11230 501 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 ABCB4P21439 1286 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 CHKAP35790 457 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 COILP38432 576 aaPredicted RBP8.26□□□□□ -1.09
VPS11-209ENST00000622309 PRKCIP41743 596 aa8.26□□□□□ -1.09
VPS11-209ENST00000622309 GALCP54803 685 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms